Concepedia

Position-specific Scoring Matrices

Position-Specific Scoring Matrix is a type of substitution matrix that incorporates position-specific scoring preferences derived from multiple sequence alignments to more accurately model the likelihood of amino acid substitutions at specific positions in protein sequences.

342

Publications

43.2K

Citations

1.2K

Authors

487

Institutions

Publications per year

2017–2026

120

Variants

Position-specific Scoring MatrixPssmPssms

Parents

Publications

342

Protein secondary structure prediction based on position-specific scoring matrices 1 1Edited by G. Von Heijne

David T. Jones · Journal of Molecular Biology · 1999 · 5.5K citations

, , +10

FIMO: scanning for occurrences of a given motif

Charles E. Grant, Timothy L. Bailey, William Stafford Noble · Bioinformatics · 2011 · 4.9K citations · Full text

, , +14

Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++

Eugene Davydov, David L. Goode, Marina Sirota et al. · PLoS Computational Biology · 2010 · 1.9K citations · Full text

, , +17

JASPAR: an open-access database for eukaryotic transcription factor binding profiles

Albin Sandelin · Nucleic Acids Research · 2003 · 1.8K citations · Full text

, , +17

Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs

John C. Obenauer · Nucleic Acids Research · 2003 · 1.6K citations · Full text

, , +17

1–5 of 342

Authors

1.2K

  1. ZY
    Zhu‐Hong You

    Xinjiang Technical Institute of Physics & Chemistry, China

    24 publications · 1.1K citations

    20

    h-index

  2. GP
    Gajendra P. S. Raghava

    Institute of Microbial Technology, India

    9 publications · 724 citations

    9

    h-index

  3. NQ
    Nguyen Quoc Khanh Le

    Taipei Medical University, Taiwan

    8 publications · 537 citations

    8

    h-index

  4. LL
    Liping Li

    Xinjiang Technical Institute of Physics & Chemistry, China

    8 publications · 212 citations

    8

    h-index

  5. JA
    Jiyong An

    China University of Mining and Technology, China

    8 publications · 243 citations

    8

    h-index

1–5 of 1.2K

Institutions

487

  1. Xinjiang Technical Institute of Physics & Chemistry

    Ürümqi, China

    19 h-index

    55 publications

    2.9K citations

  2. China University of Mining and Technology

    Xuzhou, China

    16 h-index

    52 publications

    2K citations

  3. Chinese Academy of Sciences

    Beijing, China

    15 h-index

    44 publications

    1.9K citations

  4. National Institutes of Health

    Bethesda, United States

    10 h-index

    29 publications

    8.6K citations

  5. National Center for Biotechnology Information

    Bethesda, United States

    9 h-index

    25 publications

    8.2K citations

  6. Yuan Ze University

    Taoyuan District, Taiwan

    8 h-index

    25 publications

    1.3K citations

  7. Harbin Institute of Technology

    Harbin, China

    8 h-index

    21 publications

    501 citations

  8. Zaozhuang University

    Zaozhuang, China

    8 h-index

    20 publications

    1.2K citations

1–8 of 487

Venues

  1. Bioinformatics

    37 publications · 9.3K citations

    29

    h-index

  2. Nucleic Acids Research

    32 publications · 8.5K citations

    27

    h-index

  3. BMC Bioinformatics

    31 publications · 1.6K citations

    21

    h-index

  4. PLoS ONE

    20 publications · 757 citations

    17

    h-index

  5. International Journal of Molecular Sciences

    IJMS · 12 publications · 432 citations

    12

    h-index

1–5