Concepedia

Polyploid Bioinformatics

Polyploid Bioinformatics is a specialized branch of bioinformatics that focuses on the development and application of computational methods, models, and tools specifically designed to analyze, interpret, and integrate genomic data arising from polyploid organisms, thereby addressing the unique challenges posed by polyploidy such as genome redundancy, homoeologous recombination, and allele dosage variation.

12

Publications

3.7K

Citations

51

Authors

32

Institutions

Publications per year

2017–2026

6

Parents

Publications

12

GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes

T. Rhyker Ranallo-Benavidez, Kamil S. Jaroň, Michael C. Schatz · Nature Communications · 2020 · 2.7K citations · Full text

, , +17

PolyMarker: A fast polyploid primer design pipeline

Ricardo H. Ramírez-González, Cristóbal Uauy, Mario Cáccamo · Bioinformatics · 2015 · 268 citations · Full text

, , +13

The Value of Nonmodel Genomes and an Example Using SynMap Within CoGe to Dissect the Hexaploidy that Predates the Rosids

Eric Lyons, Brent S. Pedersen, Josh Kane et al. · Tropical Plant Biology · 2008 · 227 citations

, , +14

Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids

Oliver Serang, Marcelo Mollinari, Antônio Augusto Franco Garcia · PLoS ONE · 2012 · 158 citations · Full text

, , +16

Haplotype threading: accurate polyploid phasing from long reads

Sven Schrinner, Rebecca Serra Mari, Jana Ebler et al. · Genome biology · 2020 · 95 citations · Full text

, , +17

1–5 of 12

Authors

51

  1. SS
    Sven Schrinner

    Forschungszentrum Jülich, Germany

    2 publications · 113 citations

    2

    h-index

  2. GW
    Gunnar W. Klau

    Centrum Wiskunde & Informatica, Netherlands

    2 publications · 113 citations

    2

    h-index

  3. BU
    Björn Usadel

    Forschungszentrum Jülich, Germany

    2 publications · 113 citations

    2

    h-index

  4. TM
    Tobias Marschall

    Heinrich Heine University Düsseldorf, Germany

    2 publications · 113 citations

    2

    h-index

  5. JE
    Jana Ebler

    Heinrich Heine University Düsseldorf, Germany

    2 publications · 113 citations

    2

    h-index

1–5 of 51

Institutions

32

  1. Heinrich Heine University Düsseldorf

    Düsseldorf, Germany

    2 h-index

    9 publications

    624 citations

  2. Forschungszentrum Jülich

    Jülich, Germany

    2 h-index

    2 publications

    113 citations

  3. RWTH Aachen University

    Aachen, Germany

    2 h-index

    6 publications

    339 citations

  4. Cluster of Excellence on Plant Sciences

    Düsseldorf, Germany

    2 h-index

    4 publications

    226 citations

  5. Saarland University

    Saarbrücken, Germany

    2 h-index

    5 publications

    244 citations

  6. Max Planck Institute for Informatics

    Saarbrücken, Germany

    2 h-index

    5 publications

    244 citations

  7. Johns Hopkins University

    Baltimore, United States

    1 h-index

    2 publications

    5.3K citations

  8. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    1 h-index

    1 publications

    2.7K citations

1–8 of 32

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 18 citations

    1

    h-index

  2. Methods in molecular biology

    Book series · 1 publications · 19 citations

    1

    h-index

  3. Bioinformatics

    1 publications · 268 citations

    1

    h-index

  4. BMC Plant Biology

    1 publications · 82 citations

    1

    h-index

  5. Theoretical and Applied Genetics

    1 publications · 38 citations

    1

    h-index

1–5