Concepedia

Phylogenomic Reference Sets

Phylogenomic Reference Sets is a curated collection of high-confidence, taxonomically representative genomic datasets that serve as standardized benchmarks for inferring evolutionary relationships across species through genome-scale phylogenetic analyses.

115

Publications

7.9K

Citations

796

Authors

425

Institutions

Publications per year

2017–2026

69

Parents

Publications

115

New Methods to Calculate Concordance Factors for Phylogenomic Datasets

Bùi Quang Minh, Matthew W. Hahn, Robert Lanfear · Molecular Biology and Evolution · 2020 · 738 citations · Full text

, , +15

On the path to reference genomes for all biodiversity: lessons learned and laboratory protocols created in the Sanger Tree of Life core laboratory over the first 2000 species

Caroline Howard, Amy Denton, Benjamin Jackson et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2025 · 517 citations · Full text

, , +12

A comparative genomics multitool for scientific discovery and conservation

Nature · 2020 · 444 citations · Full text

, , +17

Shotgun Mitogenomics Provides a Reference Phylogenetic Framework and Timescale for Living Xenarthrans

Gillian C. Gibb, Fabien L. Condamine, Melanie Kuch et al. · Molecular Biology and Evolution · 2015 · 269 citations · Full text

, , +15

10KP: A phylodiverse genome sequencing plan

Shifeng Cheng, Michael Melkonian, Stephen A. Smith et al. · GigaScience · 2018 · 258 citations · Full text

, , +17

1–5 of 115

Authors

796

  1. MJ
    Martijn J.T.N. Timmermans

    Imperial College London, United Kingdom

    2 publications · 173 citations

    2

    h-index

  2. BQ
    Bùi Quang Minh

    Australian National University, Australia

    2 publications · 813 citations

    2

    h-index

  3. AS
    Alexandros Stamatakis

    Heidelberg Institute for Theoretical Studies, Germany

    2 publications · 243 citations

    2

    h-index

  4. RT
    Rebecca T. Kimball

    University of Florida, United States

    2 publications · 47 citations

    2

    h-index

  5. HY
    Huanming Yang

    BGI Group (China), China

    2 publications · 374 citations

    2

    h-index

1–5 of 796

Institutions

425

  1. Centre National de la Recherche Scientifique

    Paris, France

    10 h-index

    20 publications

    2.1K citations

  2. Chinese Academy of Sciences

    Beijing, China

    8 h-index

    41 publications

    2.9K citations

  3. University of Florida

    Gainesville, United States

    6 h-index

    14 publications

    1.1K citations

  4. BGI Group (China)

    Shenzhen, China

    6 h-index

    44 publications

    5.9K citations

  5. University of Copenhagen

    Copenhagen, Denmark

    5 h-index

    14 publications

    564 citations

  6. Australian National University

    Canberra, Australia

    5 h-index

    17 publications

    1.9K citations

  7. National Museum of Natural History

    Washington, United States

    5 h-index

    9 publications

    1K citations

  8. Institut de Recherche pour le Développement

    Marseille, France

    5 h-index

    19 publications

    1.6K citations

1–8 of 425

Venues

  1. Molecular Phylogenetics and Evolution

    15 publications · 596 citations

    14

    h-index

  2. Molecular Ecology Resources

    9 publications · 360 citations

    9

    h-index

  3. Genome Biology and Evolution

    GBE · 4 publications · 180 citations

    4

    h-index

  4. PLoS ONE

    3 publications · 127 citations

    3

    h-index

  5. Frontiers in Ecology and Evolution

    3 publications · 185 citations

    3

    h-index

1–5