Concepedia

Phasing In Assembly

Phasing in Assembly is a computational method in genome sequence assembly that resolves haplotype-specific variants by distinguishing allelic differences in heterozygous regions using sequencing reads that span multiple polymorphic sites.

5

Publications

697

Citations

66

Authors

25

Institutions

Publications per year

2017–2026

3

Parents

Publications

5

De novo assembly and phasing of a Korean human genome

Jeong‐Sun Seo, Arang Rhie, Junsoo Kim et al. · Nature · 2016 · 360 citations · Full text

, , +17

A hybrid approach for de novo human genome sequence assembly and phasing

Yulia Mostovoy, Michal Levy‐Sakin, Jessica Lam et al. · Nature Methods · 2016 · 248 citations

, , +14

Gaps and complex structurally variant loci in phased genome assemblies

David Porubskỳ, Mitchell R. Vollger, William T. Harvey et al. · Genome Research · 2023 · 60 citations · Full text

, , +17

Phased nanopore assembly with Shasta and modular graph phasing with GFAse

Ryan Lorig-Roach, Melissa Meredith, Jean Monlong et al. · Genome Research · 2024 · 16 citations · Full text

, , +14

Phased nanopore assembly with Shasta and modular graph phasing with GFAse

Ryan Lorig-Roach, Melissa Meredith, Jean Monlong et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2023 · 13 citations · Full text

, , +14

1–5 of 5

Authors

66

  1. DP
    David Porubskỳ

    University of Washington, United States

    3 publications · 89 citations

    3

    h-index

  2. BP
    Benedict Paten

    University of California, Santa Cruz, United States

    3 publications · 89 citations

    3

    h-index

  3. EE
    Evan E. Eichler

    University of Washington, United States

    3 publications · 89 citations

    3

    h-index

  4. MM
    Melissa Meredith

    University of California, Santa Cruz, United States

    2 publications · 29 citations

    2

    h-index

  5. BM
    Bruce Martin

    Indiana University Bloomington, United States

    2 publications · 29 citations

    2

    h-index

1–5 of 66

Institutions

25

  1. Howard Hughes Medical Institute

    Chevy Chase, United States

    3 h-index

    7 publications

    147 citations

  2. University of California, Santa Cruz

    Santa Cruz, United States

    3 h-index

    26 publications

    468 citations

  3. University of Washington

    Seattle, United States

    3 h-index

    9 publications

    358 citations

  4. BioNano Genomics (United States)

    San Diego, United States

    2 h-index

    7 publications

    2K citations

  5. Chan Zuckerberg Initiative (United States)

    Redwood City, United States

    2 h-index

    6 publications

    87 citations

  6. Columbia University

    New York, United States

    2 h-index

    4 publications

    58 citations

  7. Northeastern University

    Boston, United States

    2 h-index

    2 publications

    29 citations

  8. Oxford Nanopore Technologies (United Kingdom)

    Oxford, United Kingdom

    2 h-index

    4 publications

    58 citations

1–8 of 25

Venues

  1. Genome Research

    GR · 2 publications · 76 citations

    2

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 13 citations

    1

    h-index

  3. Nature

    1 publications · 360 citations

    1

    h-index

  4. Nature Methods

    1 publications · 248 citations

    1

    h-index

  5. Genome biology

    1 publications · 11 citations

1–5