Concepedia

Pathway Scoring

Pathway Scoring is a computational method that quantifies the aggregate activity or enrichment of a biological pathway by integrating molecular measurements across its constituent elements, differentiating it from general pathway analysis through its focus on deriving a singular, interpretable score representative of pathway-level behavior.

9

Publications

673

Citations

45

Authors

27

Institutions

Publications per year

2017–2026

4

Parents

Publications

9

Fast and Rigorous Computation of Gene and Pathway Scores from SNP-Based Summary Statistics

David Lamparter, Daniel Marbach, Rico Rueedi et al. · PLoS Computational Biology · 2016 · 372 citations · Full text

, , +15

Analysis of gene expression data with pathway scores.

Alexander Zien, Robert Küffner, Ralf Zimmer et al. · PubMed · 2000 · 117 citations

, , +12

A Topology-Based Score for Pathway Enrichment

M Ibrahim, Sabah Jassim, Michael A. Cawthorne et al. · Journal of Computational Biology · 2012 · 55 citations

, , +16

Mathematical Justification of Expression-Based Pathway Activation Scoring (PAS)

Alexander Aliper, Michael Korzinkin, Natalia B. Kuzmina et al. · Methods in molecular biology · 2017 · 38 citations

, , +14

A probabilistic pathway score (PROPS) for classification with applications to inflammatory bowel disease

Lichy Han, Mateusz Maciejewski, Christoph Brockel et al. · Bioinformatics · 2017 · 29 citations · Full text

, , +13

1–5 of 9

Authors

45

  1. SJ
    Sabah Jassim

    University of Buckingham, United Kingdom

    2 publications · 65 citations

    2

    h-index

  2. KL
    Kenneth Langlands

    University of Buckingham, United Kingdom

    2 publications · 65 citations

    2

    h-index

  3. MI
    M Ibrahim

    University of Oxford, United Kingdom

    2 publications · 65 citations

    2

    h-index

  4. MA
    Michael A. Cawthorne

    University of Buckingham, United Kingdom

    2 publications · 65 citations

    2

    h-index

  5. JJ
    Justin J. J. van der Hooft

    Wageningen University & Research, Netherlands

    1 publications · 22 citations

    1

    h-index

1–5 of 45

Institutions

27

  1. University of Buckingham

    Buckingham, United Kingdom

    2 h-index

    8 publications

    260 citations

  2. Kurchatov Institute

    Moscow, Russia

    1 h-index

    2 publications

    76 citations

  3. Stanford University

    Stanford, United States

    1 h-index

    2 publications

    58 citations

  4. Institute of Social and Preventive Medicine

    Lausanne, Switzerland

    1 h-index

    1 publications

    372 citations

  5. Scientific Centre of Personalized Psychiatry

    Moscow, Russia

    1 h-index

    1 publications

    38 citations

  6. Institute of Bioorganic Chemistry

    Moscow, Russia

    1 h-index

    1 publications

    38 citations

  7. Maastricht University Medical Centre

    Maastricht, The Netherlands

    1 h-index

    1 publications

    17 citations

  8. Brigham and Women's Hospital

    Boston, United States

    1 h-index

    2 publications

    58 citations

1–8 of 27

Venues

  1. Metabolites

    1 publications · 22 citations

    1

    h-index

  2. Bioinformatics

    1 publications · 29 citations

    1

    h-index

  3. BMC Bioinformatics

    1 publications · 10 citations

    1

    h-index

  4. Journal of Computational Biology

    1 publications · 55 citations

    1

    h-index

  5. PLoS Computational Biology

    1 publications · 372 citations

    1

    h-index

1–5