Daniel Marbach

Wisdom of crowds for robust gene network inference

Daniel Marbach, James C. Costello, Robert Küffner et al. · Nature Methods · 2012 · 1.7K citations · Full text

Engineering, Data Science, Data Mining +8

Identification of Functional Elements and Regulatory Circuits by <i>Drosophila</i> modENCODE

Sushmita Roy, Jason Ernst, Peter V. Kharchenko et al. · Science · 2010 · 1.3K citations · Full text

Revealing strengths and weaknesses of methods for gene network inference

Daniel Marbach, Robert J. Prill, Thomas Schaffter et al. · Proceedings of the National Academy of Sciences · 2010 · 782 citations · Full text

Engineering, Genetics, Network Analysis +22

GeneNetWeaver: <i>in silico</i> benchmark generation and performance profiling of network inference methods

Thomas Schaffter, Daniel Marbach, Dario Floreano · Bioinformatics · 2011 · 568 citations · Full text

Generating Realistic <i>In Silico</i> Gene Networks for Performance Assessment of Reverse Engineering Methods

Daniel Marbach, Thomas Schaffter, Claudio Mattiussi et al. · Journal of Computational Biology · 2009 · 446 citations · Full text