Concepedia

Pathogen Genome Annotation

Pathogen Genome Annotation is the systematic computational and/or manual process of identifying and characterizing functional genomic elements within the genome of a pathogenic organism, with the purpose of enabling downstream analyses in pathogen genomics and reverse vaccinology.

320

Publications

19.8K

Citations

2.3K

Authors

700

Institutions

Publications per year

2017–2026

116

Parents

Publications

320

VFDB 2019: a comparative pathogenomic platform with an interactive web interface

Bo Liu, Dandan Zheng, Qi Jin et al. · Nucleic Acids Research · 2018 · 1.9K citations · Full text

, , +17

The EnteroBase user's guide, with case studies on <i>Salmonella</i> transmissions, <i>Yersinia pestis</i> phylogeny, and <i>Escherichia</i> core genomic diversity

Zhemin Zhou, Nabil-Fareed Alikhan, Khaled Mohamed et al. · Genome Research · 2019 · 1K citations · Full text

, , +17

VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases

Gloria I. Giraldo-Calderón, Scott Emrich, Robert M. MacCallum et al. · Nucleic Acids Research · 2014 · 716 citations · Full text

, , +17

PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data

Salvatore Cosentino, Mette Voldby Larsen, Frank M. Aarestrup et al. · PLoS ONE · 2013 · 669 citations · Full text

, , +17

Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv

J.C. Camus, Melinda J. Pryor, Claudine Médigue et al. · Microbiology · 2002 · 595 citations · Full text

, , +13

1–5 of 320

Authors

2.3K

  1. JP
    Julian Parkhill

    Wellcome Sanger Institute, United Kingdom

    8 publications · 1.2K citations

    8

    h-index

  2. OS
    Omar S. Harb

    University of Pennsylvania, United States

    8 publications · 995 citations

    8

    h-index

  3. DS
    David S. Roos

    University of Pennsylvania, United States

    8 publications · 995 citations

    8

    h-index

  4. JC
    Jessica C. Kissinger

    University of Georgia, United States

    7 publications · 754 citations

    7

    h-index

  5. DB
    David Bruce

    Los Alamos National Laboratory, United States

    5 publications · 84 citations

    5

    h-index

1–5 of 2.3K

Institutions

700

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    13 h-index

    67 publications

    12.3K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    12 h-index

    36 publications

    1.5K citations

  3. J. Craig Venter Institute

    La Jolla, United States

    12 h-index

    47 publications

    1.6K citations

  4. University of California, Davis

    Davis, United States

    11 h-index

    51 publications

    939 citations

  5. Agricultural Research Service

    Washington, United States

    10 h-index

    21 publications

    612 citations

  6. University of Georgia

    Athens, United States

    9 h-index

    84 publications

    14.6K citations

  7. Cornell University

    Ithaca, United States

    8 h-index

    25 publications

    943 citations

  8. Centers for Disease Control and Prevention

    Atlanta, United States

    8 h-index

    44 publications

    1.5K citations

1–8 of 700

Venues

  1. Nucleic Acids Research

    29 publications · 5.1K citations

    24

    h-index

  2. Journal of Bacteriology

    JB · 23 publications · 1.2K citations

    20

    h-index

  3. Genome Announcements

    GenomeA · 43 publications · 872 citations

    17

    h-index

  4. PLoS ONE

    18 publications · 1.7K citations

    17

    h-index

  5. BMC Genomics

    21 publications · 1.2K citations

    16

    h-index

1–5