Concepedia

Microbiome Diversity Analysis

Microbiome Diversity Analysis is a computational and statistical framework within environmental metagenomics that quantifies the taxonomic, functional, and phylogenetic variation of microbial communities across ecological samples to characterize ecosystem complexity and dynamics.

351

Publications

61.8K

Citations

2.6K

Authors

926

Institutions

Publications per year

2017–2026

283

Parents

Publications

351

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

, , +15

Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower, J. Fah Sathirapongsasuti, Nicola Segata et al. · Nature · 2012 · 11.9K citations · Full text

, , +17

Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data

Jasmine Chong, Peng Liu, Guangyan Zhou et al. · Nature Protocols · 2020 · 1.8K citations

, , +12

Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

Edoardo Pasolli, Francesco Asnicar, Serena Manara et al. · Cell · 2019 · 1.7K citations · Full text

, , +16

Tumor Microbiome Diversity and Composition Influence Pancreatic Cancer Outcomes

Erick Riquelme, Yu Zhang, Liangliang Zhang et al. · Cell · 2019 · 1.6K citations · Full text

, , +14

1–5 of 351

Authors

2.6K

  1. RK
    Rob Knight

    University of California San Diego, United States

    8 publications · 1.6K citations

    8

    h-index

  2. NS
    Nicola Segata

    University of Trento, Italy

    6 publications · 14.2K citations

    5

    h-index

  3. HL
    Hongzhe Li

    University of Pennsylvania, United States

    4 publications · 562 citations

    4

    h-index

  4. DM
    Daniel McDonald

    University of California San Diego, United States

    3 publications · 321 citations

    3

    h-index

  5. RP
    R. Paul Ross

    Teagasc - The Irish Agriculture and Food Development Authority, Ireland

    3 publications · 363 citations

    3

    h-index

1–5 of 2.6K

Institutions

926

  1. Chinese Academy of Sciences

    Beijing, China

    16 h-index

    38 publications

    1.4K citations

  2. University of California San Diego

    San Diego, United States

    9 h-index

    36 publications

    1.6K citations

  3. Stanford University

    Stanford, United States

    7 h-index

    18 publications

    46.2K citations

  4. Harvard University

    Cambridge, United States

    7 h-index

    16 publications

    41.6K citations

  5. Zhejiang University

    Hangzhou, China

    7 h-index

    36 publications

    1.8K citations

  6. University of Pennsylvania

    Philadelphia, United States

    6 h-index

    20 publications

    17.4K citations

  7. Johns Hopkins University

    Baltimore, United States

    6 h-index

    12 publications

    3.9K citations

  8. University College Cork

    Cork, Ireland

    6 h-index

    23 publications

    2.2K citations

1–8 of 926

Venues

  1. Frontiers in Microbiology

    29 publications · 1.4K citations

    21

    h-index

  2. Scientific Reports

    21 publications · 1.7K citations

    20

    h-index

  3. PLoS ONE

    16 publications · 24.1K citations

    15

    h-index

  4. Bioinformatics

    11 publications · 1.4K citations

    11

    h-index

  5. The Science of The Total Environment

    9 publications · 435 citations

    9

    h-index

1–5