Francesco Asnicar

Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3

Francesco Beghini, Lauren J. McIver, Aitor Blanco‐Míguez et al. · eLife · 2021 · 2.3K citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

Edoardo Pasolli, Francesco Asnicar, Serena Manara et al. · Cell · 2019 · 1.7K citations · Full text

Life Sciences, Biology, Microbiology +16

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

Aitor Blanco‐Míguez, Francesco Beghini, Fabio Cumbo et al. · Nature Biotechnology · 2023 · 1.3K citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome

Pamela Ferretti, Edoardo Pasolli, Adrian Tett et al. · Cell Host & Microbe · 2018 · 1.3K citations · Full text

Life Sciences, Maternal Health, Microbiology +16

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Andrew Maltez Thomas, Paolo Manghi, Francesco Asnicar et al. · Nature Medicine · 2019 · 1.1K citations · Full text

Life Sciences, Bioinformatics, Microbiology +17