Concepedia

Metabolic Network Simulation

Metabolic Network Simulation is a computational method that dynamically models the flow of metabolites through a biochemical network under specified constraints to predict systemic metabolic behavior.

394

Publications

27.5K

Citations

1.2K

Authors

489

Institutions

Publications per year

2017–2026

84

Parents

Publications

394

COPASI—a COmplex PAthway SImulator

Stefan Hoops, Sven Sahle, Ralph Gauges et al. · Bioinformatics · 2006 · 2.7K citations · Full text

, , +14

Predicting Network Activity from High Throughput Metabolomics

Shuzhao Li, Youngja Park, Sai Duraisingham et al. · PLoS Computational Biology · 2013 · 970 citations · Full text

, , +17

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

Scott A. Becker, Adam M. Feist, Monica L. Mo et al. · Nature Protocols · 2007 · 804 citations

, , +17

E-CELL: software environment for whole-cell simulation.

Masaru Tomita, Kazuaki Hashimoto, Kazutoshi Takahashi et al. · Bioinformatics · 1999 · 765 citations · Full text

, , +14

Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation.

Pedro Mendes, Douglas B. Kell · Bioinformatics · 1998 · 691 citations · Full text

, , +16

1–5 of 394

Authors

1.2K

  1. BØ
    Bernhard Ø. Palsson

    University of California San Diego, United States

    17 publications · 2.3K citations

    14

    h-index

  2. PM
    Pedro Mendes

    Virginia Tech, United States

    12 publications · 4.4K citations

    12

    h-index

  3. DR
    Doraiswami Ramkrishna

    Purdue University West Lafayette, United States

    7 publications · 458 citations

    7

    h-index

  4. MT
    Masaru Tomita

    Keio University, Japan

    6 publications · 911 citations

    6

    h-index

  5. JN
    Jens Nielsen

    Chalmers University of Technology, Sweden

    6 publications · 712 citations

    6

    h-index

1–5 of 1.2K

Institutions

489

  1. University of California San Diego

    San Diego, United States

    13 h-index

    45 publications

    9.8K citations

  2. ETH Zurich

    Zurich, Switzerland

    10 h-index

    22 publications

    1.6K citations

  3. Purdue University West Lafayette

    West Lafayette, United States

    9 h-index

    23 publications

    1.4K citations

  4. La Jolla Bioengineering Institute

    San Diego, United States

    8 h-index

    13 publications

    1.6K citations

  5. Max Planck Institute for Dynamics of Complex Technical Systems

    Magdeburg, Germany

    8 h-index

    21 publications

    1.4K citations

  6. University of Manchester

    Manchester, United Kingdom

    8 h-index

    22 publications

    2K citations

  7. Virginia Tech

    Blacksburg, United States

    8 h-index

    24 publications

    14.1K citations

  8. Technical University of Denmark

    Kongens Lyngby, Denmark

    8 h-index

    18 publications

    1.1K citations

1–8 of 489

Venues

  1. Bioinformatics

    33 publications · 6.5K citations

    26

    h-index

  2. BMC Systems Biology

    20 publications · 1.5K citations

    16

    h-index

  3. Journal of Theoretical Biology

    15 publications · 678 citations

    15

    h-index

  4. PLoS Computational Biology

    15 publications · 2.1K citations

    14

    h-index

  5. Metabolic Engineering

    11 publications · 968 citations

    11

    h-index

1–5