Concepedia

Machine Learning For Microbiome Data

Machine Learning for Microbiome Data is a computational methodology that applies machine learning algorithms to microbiome datasets to infer patterns, relationships, or predictions specific to microbial community structure and function, distinguished by its integration of high-dimensional biological data with statistical learning techniques for hypothesis generation, classification, or regression in microbiome research.

123

Publications

5.7K

Citations

762

Authors

403

Institutions

Publications per year

2017–2026

114

Parents

Publications

123

MicrobiotaProcess: A comprehensive R package for deep mining microbiome

Shuangbin Xu, Li Zhan, Wenli Tang et al. · The Innovation · 2023 · 276 citations · Full text

, , +12

q2-sample-classifier: machine-learning tools for microbiome classification and regression

Nicholas A. Bokulich, Matthew R. Dillon, Evan Bolyen et al. · The Journal of Open Source Software · 2018 · 217 citations · Full text

, , +14

Major data analysis errors invalidate cancer microbiome findings

Abraham Gihawi, Yuchen Ge, Jennifer Lu et al. · mBio · 2023 · 201 citations · Full text

, , +17

DeepMicro: deep representation learning for disease prediction based on microbiome data

Min Oh, Liqing Zhang · Scientific Reports · 2020 · 178 citations · Full text

, , +17

Machine learning to predict microbial community functions: An analysis of dissolved organic carbon from litter decomposition

Jaron Thompson, Renee Johansen, John Dunbar et al. · PLoS ONE · 2019 · 141 citations · Full text

, , +17

1–5 of 123

Authors

762

  1. AT
    Alice Tang

    University of California, San Francisco, United States

    3 publications · 67 citations

    3

    h-index

  2. AR
    Alennie Roldan

    University of California, San Francisco, United States

    3 publications · 67 citations

    3

    h-index

  3. MS
    Marina Sirota

    University of California, San Francisco, United States

    3 publications · 67 citations

    3

    h-index

  4. XJ
    Xingpeng Jiang

    Central China Normal University, China

    3 publications · 91 citations

    3

    h-index

  5. SS
    Samuel S. Minot

    Fred Hutch Cancer Center, United States

    3 publications · 67 citations

    3

    h-index

1–5 of 762

Institutions

403

  1. Harvard University

    Cambridge, United States

    7 h-index

    14 publications

    478 citations

  2. Utrecht University

    Utrecht, The Netherlands

    5 h-index

    12 publications

    750 citations

  3. Stanford University

    Stanford, United States

    5 h-index

    32 publications

    680 citations

  4. University of Bari Aldo Moro

    Bari, Italy

    5 h-index

    26 publications

    1K citations

  5. Huazhong University of Science and Technology

    Wuhan, China

    4 h-index

    27 publications

    828 citations

  6. University of Michigan

    Ann Arbor, United States

    4 h-index

    26 publications

    520 citations

  7. Fred Hutch Cancer Center

    Seattle, United States

    4 h-index

    26 publications

    528 citations

  8. University of Toronto

    Toronto, Canada

    4 h-index

    7 publications

    367 citations

1–8 of 403

Venues

  1. Scientific Reports

    8 publications · 519 citations

    8

    h-index

  2. Frontiers in Microbiology

    6 publications · 305 citations

    6

    h-index

  3. Briefings in Bioinformatics

    5 publications · 148 citations

    5

    h-index

  4. Frontiers in Genetics

    5 publications · 166 citations

    5

    h-index

  5. BMC Bioinformatics

    5 publications · 162 citations

    5

    h-index

1–5