Concepedia

Graph-based Function Prediction

Graph-Based Function Prediction is a computational method that leverages the topological structure of biological networks represented as graphs to infer the biological functions of unannotated nodes based on the annotated functions of their network neighbors.

69

Publications

5.6K

Citations

238

Authors

146

Institutions

Publications per year

2017–2026

29

Parents

Publications

69

Protein function prediction via graph kernels

Karsten Borgwardt, Cheng Soon Ong, Stefan Schönauer et al. · Computer applications in the biosciences · 2005 · 1.1K citations

, , +13

Structure-based protein function prediction using graph convolutional networks

Vladimir Gligorijević, P. Douglas Renfrew, Tomasz Kościółek et al. · Nature Communications · 2021 · 907 citations · Full text

, , +15

Predicting protein function from protein/proteininteraction data: a probabilistic approach

Stanley Letovsky, Simon Kasif · Bioinformatics · 2003 · 385 citations

, , +17

GeneMANIA: Fast gene network construction and function prediction for Cytoscape

Jason Montojo, Khalid Zuberi, Harold Rodriguez et al. · F1000Research · 2014 · 282 citations · Full text

, , +17

Neuro-symbolic representation learning on biological knowledge graphs

Mona Alshahrani, Omar Maddouri, Akira R. Kinjo et al. · Bioinformatics · 2017 · 151 citations · Full text

, , +14

1–5 of 69

Authors

238

  1. QM
    Quaid Morris

    University of Toronto, Canada

    3 publications · 445 citations

    3

    h-index

  2. GV
    Giorgio Valentini

    University of Milan, Italy

    3 publications · 203 citations

    3

    h-index

  3. IF
    I. Fisk

    European Organization for Nuclear Research, Switzerland

    2 publications · 984 citations

    2

    h-index

  4. ZZ
    Zhu Zhang

    Hong Kong Baptist University, Hong Kong SAR China

    2 publications · 45 citations

    2

    h-index

  5. DB
    Daniel Berenberg

    New York University, United States

    2 publications · 984 citations

    2

    h-index

1–5 of 238

Institutions

146

  1. New York University

    New York, United States

    4 h-index

    9 publications

    3K citations

  2. University of Milan

    Milan, Italy

    4 h-index

    7 publications

    313 citations

  3. Harvard University

    Cambridge, United States

    4 h-index

    4 publications

    1K citations

  4. Jagiellonian University

    Krakow, Poland

    3 h-index

    3 publications

    1K citations

  5. Massachusetts General Hospital

    Boston, United States

    3 h-index

    3 publications

    1K citations

  6. University of California San Diego

    San Diego, United States

    3 h-index

    9 publications

    3.1K citations

  7. University of Toronto

    Toronto, Canada

    3 h-index

    9 publications

    1.7K citations

  8. Broad Institute

    Cambridge, United States

    3 h-index

    9 publications

    3.1K citations

1–8 of 146

Venues

  1. Bioinformatics

    11 publications · 1.2K citations

    10

    h-index

  2. 6

    h-index

  3. Nature Communications

    4 publications · 1K citations

    4

    h-index

  4. PLoS ONE

    4 publications · 96 citations

    4

    h-index

  5. Briefings in Bioinformatics

    3 publications · 177 citations

    3

    h-index

1–5