Concepedia

Fasta Algorithms

FASTA Algorithms is a computational method in bioinformatics that distinguishes itself by employing heuristic techniques to rapidly identify regions of local sequence similarity between nucleotide or protein sequences through initial k-mer matching followed by optimal alignment refinement.

225

Publications

56.3K

Citations

725

Authors

341

Institutions

Publications per year

2017–2026

46

Variants

Fasta

Parents

Publications

225

Improved tools for biological sequence comparison.

William R. Pearson, David J. Lipman · Proceedings of the National Academy of Sciences · 1988 · 11.3K citations · Full text

, , +15

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

R. C. Edgar · BMC Bioinformatics · 2004 · 9.4K citations · Full text

, , +13

ViennaRNA Package 2.0

Ronny Lorenz, Christian Höner zu Siederdissen, Hakim Tafer et al. · Algorithms for Molecular Biology · 2011 · 5.4K citations · Full text

, , +17

Multiple sequence alignment with the Clustal series of programs

Nucleic Acids Research · 2003 · 4.9K citations · Full text

, , +14

[5] Rapid and sensitive sequence comparison with FASTP and FASTA

William R. Pearson · Methods in enzymology on CD-ROM/Methods in enzymology · 1990 · 2K citations

, , +9

1–5 of 225

Authors

725

  1. WR
    William R. Pearson

    University of Virginia, United States

    14 publications · 15.3K citations

    13

    h-index

  2. WM
    Webb Miller

    Pennsylvania State University, United States

    3 publications · 228 citations

    3

    h-index

  3. KC
    Kevin Charter

    University of Alberta, Canada

    2 publications · 48 citations

    3

    h-index

  4. ZA
    Zaid Al-Ars

    Delft University of Technology, Netherlands

    3 publications · 99 citations

    3

    h-index

  5. TR
    Torbjørn Rognes

    University of Oslo, Norway

    3 publications · 596 citations

    3

    h-index

1–5 of 725

Institutions

341

  1. University of Virginia

    Charlottesville, United States

    12 h-index

    15 publications

    24.9K citations

  2. University of Washington

    Seattle, United States

    7 h-index

    13 publications

    1.3K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    7 h-index

    11 publications

    1.5K citations

  4. National Institutes of Health

    Bethesda, United States

    5 h-index

    11 publications

    621 citations

  5. Sorbonne Université

    Paris, France

    4 h-index

    6 publications

    1.1K citations

  6. Fundação Oswaldo Cruz

    Rio de Janeiro, Brazil

    4 h-index

    9 publications

    604 citations

  7. Harvard University

    Cambridge, United States

    3 h-index

    9 publications

    400 citations

  8. Stony Brook University

    Stony Brook, United States

    3 h-index

    13 publications

    848 citations

1–8 of 341

Venues

  1. Nucleic Acids Research

    37 publications · 9.1K citations

    30

    h-index

  2. Bioinformatics

    33 publications · 3.5K citations

    24

    h-index

  3. BMC Bioinformatics

    10 publications · 10.2K citations

    10

    h-index

  4. Computer applications in the biosciences

    CABIOS · 8 publications · 1.9K citations

    8

    h-index

  5. Molecular Ecology Resources

    4 publications · 679 citations

    4

    h-index

1–5