Concepedia

Exon Junction Analysis

Exon Junction Analysis is a computational method in transcript sequence analysis that identifies and characterizes the boundaries between spliced exons in mRNA sequences to infer alternative splicing events and transcript isoforms.

117

Publications

12.9K

Citations

1.3K

Authors

226

Institutions

Publications per year

2017–2026

24

Parents

Publications

117

The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads

Yang Liao, Gordon K. Smyth, Wei Shi · Nucleic Acids Research · 2019 · 3.2K citations · Full text

, , +16

Genome-Wide Survey of Human Alternative Pre-mRNA Splicing with Exon Junction Microarrays

Jason M. Johnson, John C. Castle, Philip W. Garrett-Engele et al. · Science · 2003 · 1.4K citations

, , +12

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

André Kahles, Kjong-Van Lehmann, Nora C. Toussaint et al. · Cancer Cell · 2018 · 962 citations · Full text

, , +17

Systematic evaluation of spliced alignment programs for RNA-seq data

Pär G. Engström, Tamara Steijger, Botond Sipos et al. · Nature Methods · 2013 · 558 citations · Full text

, , +17

Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs

Hagen Tilgner, David G. Knowles, Rory Johnson et al. · Genome Research · 2012 · 500 citations · Full text

, , +13

1–5 of 117

Authors

1.3K

  1. AN
    Abhinav Nellore

    Oregon Health & Science University, United States

    7 publications · 613 citations

    7

    h-index

  2. AE
    Andrew E. Jaffe

    Johns Hopkins University, United States

    6 publications · 550 citations

    6

    h-index

  3. BL
    Ben Langmead

    Johns Hopkins University, United States

    6 publications · 590 citations

    6

    h-index

  4. JT
    Jeffrey T. Leek

    Johns Hopkins University, United States

    5 publications · 515 citations

    5

    h-index

  5. LC
    Leonardo Collado‐Torres

    Lieber Institute for Brain Development, United States

    5 publications · 515 citations

    5

    h-index

1–5 of 1.3K

Institutions

226

  1. Johns Hopkins University

    Baltimore, United States

    8 h-index

    56 publications

    5.6K citations

  2. Lieber Institute for Brain Development

    Baltimore, United States

    6 h-index

    23 publications

    1.5K citations

  3. Johns Hopkins Medicine

    Baltimore, United States

    6 h-index

    17 publications

    2.1K citations

  4. Harvard University

    Cambridge, United States

    5 h-index

    14 publications

    3.3K citations

  5. Oregon Health & Science University

    Portland, United States

    4 h-index

    8 publications

    498 citations

  6. Baylor College of Medicine

    Houston, United States

    4 h-index

    13 publications

    1.9K citations

  7. Inserm

    Paris, France

    4 h-index

    14 publications

    1.6K citations

  8. University of Iowa

    Iowa City, United States

    4 h-index

    13 publications

    1K citations

1–8 of 226

Venues

  1. Nucleic Acids Research

    11 publications · 4.3K citations

    11

    h-index

  2. Bioinformatics

    10 publications · 519 citations

    10

    h-index

  3. BMC Genomics

    5 publications · 148 citations

    5

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 5 publications · 144 citations

    5

    h-index

  5. PLoS ONE

    5 publications · 261 citations

    5

    h-index

1–5