Enhancer Profiling

Enhancer Profiling is a genomic analysis technique that identifies and characterizes regulatory DNA sequences, known as enhancers, by measuring their activity states across different cellular contexts through epigenomic markers such as histone modifications, chromatin accessibility, or transcription factor binding.

Publications

3.1K

Citations

442

Authors

163

Institutions

Publications per year

2017–2026

Parents

Epigenomic Profiling

Publications

Epigenomic Enhancer Profiling Defines a Signature of Colon Cancer

Batool Akhtar‐Zaidi, Richard Cowper‐Sal·lari, Olivia Corradin et al. · Science · 2012 · 350 citations · Full text

Medicine, Genetics, Oncology +16

EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species

Tianshun Gao, Jiang Qian · Nucleic Acids Research · 2019 · 333 citations · Full text

Life Sciences, Bioinformatics, Genetics +13

RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State

Nisha Rajagopal, Wei Xie, Yan Li et al. · PLoS Computational Biology · 2013 · 246 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +10

Resolving systematic errors in widely used enhancer activity assays in human cells

Felix Muerdter, Łukasz M. Boryń, Ashley R. Woodfin et al. · Nature Methods · 2017 · 243 citations · Full text

Medicine, Cell Biology, Pathway Analysis +9

Therapeutic targeting of ependymoma as informed by oncogenic enhancer profiling

Stephen C. Mack, Kristian W. Pajtler, Lukas Chávez et al. · Nature · 2017 · 227 citations · Full text

Medicine, Cancer Biology, Oncology +14

1–5 of 34

Authors

442

PT
Patrick Tan
Duke-NUS Medical School, Singapore
4 publications · 141 citations
4
h-index
IP
Ingrid Plajzer-Frick
Lawrence Berkeley National Laboratory, United States
3 publications · 178 citations
3
h-index
PC
Peter C. Scacheri
Case Western Reserve University, United States
3 publications · 706 citations
3
h-index
QP
Quan Pham
Lawrence Berkeley National Laboratory, United States
3 publications · 178 citations
3
h-index
BJ
Brandon J. Mannion
Lawrence Berkeley National Laboratory, United States
3 publications · 178 citations
3
h-index

1–5 of 442

Institutions

163

1–8 of 163

Venues

Nucleic Acids Research
4 publications · 410 citations
4
h-index
Gut
3 publications · 119 citations
3
h-index
bioRxiv (Cold Spring Harbor Laboratory)
Repository · 3 publications · 48 citations
3
h-index
Nature Methods
2 publications · 361 citations
2
h-index
Scientific Reports
2 publications · 84 citations
2
h-index

1–5