Concepedia

Coverage Depth Analysis

Coverage Depth Analysis is a quantitative assessment method in nucleic acid sequencing that measures the average number of times a nucleotide in a given genomic region is sequenced, thereby distinguishing itself from other analytical approaches by evaluating the completeness and reliability of sequencing data with respect to detection sensitivity and variant calling accuracy.

53

Publications

7.6K

Citations

416

Authors

174

Institutions

Publications per year

2017–2026

25

Parents

Publications

53

A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers

Michael A. Quail, Miriam Smith, Paul Coupland et al. · BMC Genomics · 2012 · 2.1K citations · Full text

, , +9

Mosdepth: quick coverage calculation for genomes and exomes

Brent S. Pedersen, Aaron R. Quinlan · Bioinformatics · 2017 · 1.3K citations · Full text

, , +14

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing

J. Cristobal Vera, Christopher W. Wheat, Howard W. Fescemyer et al. · Molecular Ecology · 2008 · 740 citations

, , +11

Subsistence strategies in traditional societies distinguish gut microbiomes

Alexandra J. Obregón-Tito, Raúl Y. Tito, Jessica L. Metcalf et al. · Nature Communications · 2015 · 591 citations · Full text

, , +17

PACVr: plastome assembly coverage visualization in R

Michael Gruenstaeudl, Nils Jenke · BMC Bioinformatics · 2020 · 341 citations · Full text

, , +17

1–5 of 53

Authors

416

  1. JS
    Jeffrey S. Ross

    Foundation Medicine (United States)

    3 publications · 222 citations

    3

    h-index

  2. BS
    Brent S. Pedersen

    University of Utah, United States

    2 publications · 1.4K citations

    2

    h-index

  3. PJ
    Philip J. Stephens

    Foundation Medicine (United States)

    2 publications · 181 citations

    2

    h-index

  4. RY
    Roman Yelensky

    Foundation Medicine (United States)

    2 publications · 181 citations

    2

    h-index

  5. VA
    Vincent A. Miller

    Foundation Medicine (United States)

    2 publications · 181 citations

    2

    h-index

1–5 of 416

Institutions

174

  1. Chinese Academy of Sciences

    Beijing, China

    4 h-index

    10 publications

    473 citations

  2. University of California San Diego

    San Diego, United States

    2 h-index

    2 publications

    918 citations

  3. Albany Medical Center Hospital

    Albany, United States

    2 h-index

    2 publications

    181 citations

  4. Russian Academy of Sciences

    Moscow, Russia

    2 h-index

    2 publications

    55 citations

  5. City of Hope

    Lancaster, United States

    2 h-index

    6 publications

    3K citations

  6. Science for Life Laboratory

    Stockholm, Sweden

    2 h-index

    7 publications

    308 citations

  7. University of California, San Francisco

    San Francisco, United States

    2 h-index

    6 publications

    244 citations

  8. Universidade Federal de Minas Gerais

    Belo Horizonte, Brazil

    2 h-index

    21 publications

    861 citations

1–8 of 174

Venues

  1. BMC Genomics

    6 publications · 2.6K citations

    6

    h-index

  2. PLoS ONE

    6 publications · 178 citations

    6

    h-index

  3. Bioinformatics

    5 publications · 1.7K citations

    5

    h-index

  4. BMC Bioinformatics

    3 publications · 367 citations

    3

    h-index

  5. The Oncologist

    3 publications · 222 citations

    3

    h-index

1–5