Concepedia

Contig Merging

Contig Merging is a computational method in genome assembly that integrates overlapping or adjacent contigs into longer contiguous sequences by resolving sequence redundancies and ambiguities to improve scaffold continuity and accuracy.

19

Publications

3K

Citations

96

Authors

53

Institutions

Publications per year

2017–2026

6

Parents

Publications

19

BBMerge – Accurate paired shotgun read merging via overlap

Brian Bushnell, Jonathan Rood, Esther Singer · PLoS ONE · 2017 · 1.7K citations · Full text

, , +17

CISA: Contig Integrator for Sequence Assembly of Bacterial Genomes

Shin-Hung Lin, Yu-Chieh Liao · PLoS ONE · 2013 · 271 citations · Full text

, , +13

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

Martin Swain, Isheng Jason Tsai, Samual A Assefa et al. · Nature Protocols · 2012 · 184 citations

, , +14

Gapless assembly of maize chromosomes using long-read technologies

Jianing Liu, Arun S. Seetharam, Kapeel Chougule et al. · Genome biology · 2020 · 144 citations · Full text

, , +17

Metassembler: merging and optimizing de novo genome assemblies

Alejandro Wences, Michael C. Schatz · Genome biology · 2015 · 135 citations · Full text

, , +14

1–5 of 19

Authors

96

  1. VL
    Víctor Llaca

    Corteva (United States), United States

    1 publications · 144 citations

    1

    h-index

  2. ZL
    Zhixiu Lu

    Shanghai University, China

    1 publications · 16 citations

    1

    h-index

  3. AH
    Andreas H. Ronneseth

    Arizona State University, United States

    1 publications · 29 citations

    1

    h-index

  4. TD
    Thomas D. Otto

    Wellcome Sanger Institute, United Kingdom

    1 publications · 184 citations

    1

    h-index

  5. MC
    Michael C. Schatz

    Johns Hopkins University, United States

    1 publications · 135 citations

    1

    h-index

1–5 of 96

Institutions

53

  1. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    2 h-index

    4 publications

    558 citations

  2. Universidad Nacional Autónoma de México

    Mexico City, Mexico

    2 h-index

    2 publications

    169 citations

  3. Robert W. Holley Center for Agriculture & Health

    Ithaca, United States

    1 h-index

    1 publications

    144 citations

  4. Freie Universität Berlin

    Berlin, Germany

    1 h-index

    1 publications

    94 citations

  5. Génétique et amélioration des fruits et légumes

    Montfavet, France

    1 h-index

    2 publications

    70 citations

  6. University of Georgia

    Athens, United States

    1 h-index

    5 publications

    720 citations

  7. National Laboratory of the Rockies

    Golden, United States

    1 h-index

    1 publications

    1.7K citations

  8. Delaware Academy of Medicine

    Newark, United States

    1 h-index

    4 publications

    480 citations

1–8 of 53

Venues

  1. Genome biology

    2 publications · 279 citations

    2

    h-index

  2. PLoS ONE

    2 publications · 2K citations

    2

    h-index

  3. Viruses

    1 publications · 38 citations

    1

    h-index

  4. Algorithms for Molecular Biology

    AMB · 1 publications · 24 citations

    1

    h-index

  5. Bioinformatics

    1 publications · 39 citations

    1

    h-index

1–5