Concepedia

Cluster Annotation

Cluster Annotation is a methodological contribution in single-cell data analysis that entails the biological interpretation of cell clusters by assigning biologically meaningful labels based on marker gene expression or functional profiles, thereby distinguishing it from other clustering steps through its focus on functional and biological identity inference.

57

Publications

4.7K

Citations

268

Authors

131

Institutions

Publications per year

2017–2026

30

Parents

Publications

57

Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data

Aleksandr Ianevski, Anil K. Giri, Tero Aittokallio · Nature Communications · 2022 · 785 citations · Full text

, , +17

AutoAnnotate: A Cytoscape app for summarizing networks with semantic annotations

Mike Kucera, Ruth Isserlin, Arkady Arkhangorodsky et al. · F1000Research · 2016 · 400 citations · Full text

, , +12

scCATCH: Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data

Xin Shao, Jie Liao, Xiaoyan Lu et al. · iScience · 2020 · 315 citations · Full text

, , +17

15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis

Jane Lo, Sor-Cheng Lee, Min Xu et al. · Genome Research · 2003 · 265 citations · Full text

, , +17

Application of independent component analysis to microarrays

Su‐In Lee, Serafim Batzoglou · Genome biology · 2003 · 261 citations · Full text

, , +17

1–5 of 57

Authors

268

  1. GD
    Gary D. Bader

    University of Toronto, Canada

    3 publications · 521 citations

    3

    h-index

  2. AR
    Alexander R. Pico

    Gladstone Institutes, United States

    2 publications · 121 citations

    2

    h-index

  3. JJ
    J. Javier Díaz-Mejía

    University of Toronto, Canada

    2 publications · 121 citations

    2

    h-index

  4. TK
    Troy Ketela

    University of Toronto, Canada

    2 publications · 121 citations

    2

    h-index

  5. TJ
    Trevor J. Pugh

    Princess Margaret Cancer Centre, Canada

    2 publications · 121 citations

    2

    h-index

1–5 of 268

Institutions

131

  1. University of Toronto

    Toronto, Canada

    3 h-index

    12 publications

    2.1K citations

  2. The University of Melbourne

    Melbourne, Australia

    2 h-index

    4 publications

    70 citations

  3. Gladstone Institutes

    San Francisco, United States

    2 h-index

    2 publications

    121 citations

  4. University Health Network

    Toronto, Canada

    2 h-index

    6 publications

    363 citations

  5. Johannes Gutenberg University Mainz

    Mainz, Germany

    2 h-index

    3 publications

    462 citations

  6. Toronto General Hospital Research Institute

    Toronto, Canada

    2 h-index

    2 publications

    121 citations

  7. Toronto General Hospital

    Toronto, Canada

    2 h-index

    2 publications

    121 citations

  8. Humboldt-Universität zu Berlin

    Berlin, Germany

    2 h-index

    5 publications

    297 citations

1–8 of 131

Venues

  1. Bioinformatics

    7 publications · 352 citations

    7

    h-index

  2. BMC Bioinformatics

    3 publications · 333 citations

    3

    h-index

  3. Nature Communications

    3 publications · 1.1K citations

    3

    h-index

  4. Nucleic Acids Research

    3 publications · 111 citations

    3

    h-index

  5. F1000Research

    3 publications · 521 citations

    3

    h-index

1–5