Concepedia

Cell-type-specific Network Inference

Cell-Type-Specific Network Inference is a regulatory network inference method that specifically reconstructs gene regulatory interactions within individual cell types by leveraging single-cell omics data to account for cellular heterogeneity.

78

Publications

4.7K

Citations

396

Authors

188

Institutions

Publications per year

2017–2026

68

Parents

Publications

78

Dissecting cell identity via network inference and in silico gene perturbation

Kenji Kamimoto, Blerta Stringa, Christy M. Hoffmann et al. · Nature · 2023 · 647 citations · Full text

, , +17

Predicting cell-to-cell communication networks using NATMI

Rui Hou, Elena Denisenko, Huan Ting Ong et al. · Nature Communications · 2020 · 293 citations · Full text

, , +17

Evaluating methods of inferring gene regulatory networks highlights their lack of performance for single cell gene expression data

Shuonan Chen, Jessica C. Mar · BMC Bioinformatics · 2018 · 259 citations · Full text

, , +16

Single-cell transcriptomics unveils gene regulatory network plasticity

Giovanni Iacono, Ramon Massoni-Badosa, Holger Heyn · Genome biology · 2019 · 246 citations · Full text

, , +16

Functional inference of gene regulation using single-cell multi-omics

Vinay K. Kartha, Fabiana M. Duarte, Yan Hu et al. · Cell Genomics · 2022 · 235 citations · Full text

, , +16

1–5 of 78

Authors

396

  1. QZ
    Quan Zou

    University of Electronic Science and Technology of China, China

    3 publications · 250 citations

    3

    h-index

  2. SR
    Sushmita Roy

    University of Wisconsin–Madison, United States

    3 publications · 154 citations

    3

    h-index

  3. VK
    Vinay K. Kartha

    Harvard University, United States

    2 publications · 256 citations

    2

    h-index

  4. YH
    Yan Hu

    Harvard University, United States

    2 publications · 256 citations

    2

    h-index

  5. AE
    Andrew Earl

    Harvard University, United States

    2 publications · 256 citations

    2

    h-index

1–5 of 396

Institutions

188

  1. Harvard University

    Cambridge, United States

    7 h-index

    31 publications

    1.9K citations

  2. Broad Institute

    Cambridge, United States

    5 h-index

    19 publications

    1.6K citations

  3. University of Wisconsin–Madison

    Madison, United States

    4 h-index

    22 publications

    1.5K citations

  4. Chinese Academy of Sciences

    Beijing, China

    4 h-index

    15 publications

    1.4K citations

  5. Carnegie Mellon University

    Pittsburgh, United States

    4 h-index

    11 publications

    358 citations

  6. University of Electronic Science and Technology of China

    Chengdu, China

    3 h-index

    5 publications

    526 citations

  7. Brigham and Women's Hospital

    Boston, United States

    3 h-index

    11 publications

    242 citations

  8. Icahn School of Medicine at Mount Sinai

    New York, United States

    3 h-index

    6 publications

    206 citations

1–8 of 188

Venues

  1. Briefings in Bioinformatics

    5 publications · 225 citations

    6

    h-index

  2. PLoS Computational Biology

    6 publications · 272 citations

    6

    h-index

  3. Bioinformatics

    6 publications · 182 citations

    6

    h-index

  4. Nature Communications

    4 publications · 689 citations

    5

    h-index

  5. Nucleic Acids Research

    5 publications · 373 citations

    5

    h-index

1–5