Concepedia

Cell Hashing Doublet Detection

Cell Hashing Doublet Detection is a computational method in single-cell genomics that identifies doublets—artifactual multiplets arising from the co-encapsulation of multiple cells in a droplet-based assay—by leveraging discrepancies in cell-surface hash tag oligonucleotide signals to distinguish genuine single-cell events from technical multiplets.

6

Publications

1.6K

Citations

36

Authors

16

Institutions

Publications per year

2017–2026

6

Parents

Publications

6

Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis et al. · Genome biology · 2018 · 1.1K citations · Full text

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DoubletDecon: Deconvoluting Doublets from Single-Cell RNA-Sequencing Data

Erica A. K. DePasquale, Daniel Schnell, Pieter-Jan Van Camp et al. · Cell Reports · 2019 · 209 citations · Full text

, , +17

CiteFuse enables multi-modal analysis of CITE-seq data

Hani Jieun Kim, Yingxin Lin, Thomas A. Geddes et al. · Bioinformatics · 2020 · 111 citations

, , +17

Comparative analysis of antibody- and lipid-based multiplexing methods for single-cell RNA-seq

Viacheslav Mylka, Irina Matetovici, Suresh Poovathingal et al. · Genome biology · 2022 · 56 citations · Full text

, , +15

Cell “hashing” with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2017 · 33 citations · Full text

, , +15

1–5 of 6

Authors

36

  1. SH
    Stephanie Hao

    New York Genome Center, United States

    2 publications · 1.2K citations

    2

    h-index

  2. HS
    Harinder Singh

    University of Chicago, United States

    2 publications · 229 citations

    2

    h-index

  3. MS
    Marlon Stoeckius

    New York Genome Center, United States

    2 publications · 1.2K citations

    2

    h-index

  4. BH
    Brian Houck‐Loomis

    Memorial Sloan Kettering Cancer Center, United States

    2 publications · 1.2K citations

    2

    h-index

  5. DS
    Daniel Schnell

    Cincinnati Children's Hospital Medical Center, United States

    2 publications · 229 citations

    2

    h-index

1–5 of 36

Institutions

16

  1. Cincinnati Children's Hospital Medical Center

    Cincinnati, United States

    2 h-index

    14 publications

    1.6K citations

  2. BioLegend (United States)

    San Diego, United States

    2 h-index

    2 publications

    1.2K citations

  3. New York Genome Center

    New York, United States

    2 h-index

    13 publications

    8.2K citations

  4. University of Cincinnati

    Cincinnati, United States

    2 h-index

    7 publications

    1.1K citations

  5. VIB-KU Leuven Center for Microbiology

    Leuven, Belgium

    1 h-index

    1 publications

    56 citations

  6. Janssen (Belgium)

    Beerse, Belgium

    1 h-index

    3 publications

    168 citations

  7. Vrije Universiteit Brussel

    Brussels, Belgium

    1 h-index

    2 publications

    112 citations

  8. HOGENT University of Applied Sciences and Arts

    Ghent, Belgium

    1 h-index

    1 publications

    56 citations

1–8 of 16

Venues

  1. Genome biology

    2 publications · 1.2K citations

    2

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 53 citations

    2

    h-index

  3. Bioinformatics

    1 publications · 111 citations

    1

    h-index

  4. Cell Reports

    1 publications · 209 citations

    1

    h-index

  5. Nature Communications

    1 publications · 14 citations

1–5