Concepedia

Bulk Transcriptome Profiling

Bulk Transcriptome Profiling is a high-throughput molecular biology approach that measures the average gene expression levels across a population of cells within a tissue sample, enabling the comprehensive characterization of transcriptional activity without resolution at the single-cell level.

100

Publications

12K

Citations

940

Authors

377

Institutions

Publications per year

2017–2026

94

Parents

Publications

100

TIMER2.0 for analysis of tumor-infiltrating immune cells

Taiwen Li, Jingxin Fu, Zexian Zeng et al. · Nucleic Acids Research · 2020 · 5.7K citations · Full text

, , +17

Profiling Cell Type Abundance and Expression in Bulk Tissues with CIBERSORTx

Chloé B. Steen, Chih Long Liu, Ash A. Alizadeh et al. · Methods in molecular biology · 2020 · 619 citations · Full text

, , +14

Leveraging diverse cell-death patterns to predict the prognosis and drug sensitivity of triple-negative breast cancer patients after surgery

Yutian Zou, Jindong Xie, Shaoquan Zheng et al. · International Journal of Surgery · 2022 · 440 citations

, , +17

Single-cell and bulk transcriptome sequencing identifies two epithelial tumor cell states and refines the consensus molecular classification of colorectal cancer

Ignasius Joanito, Pratyaksha Wirapati, Nancy Q. Zhao et al. · Nature Genetics · 2022 · 440 citations · Full text

, , +17

Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data

Christian H. Holland, Jovan Tanevski, Javier Perales-Patón et al. · Genome biology · 2020 · 354 citations · Full text

, , +17

1–5 of 100

Authors

940

  1. XD
    Xinpei Deng

    Sun Yat-sen University Cancer Center, China

    3 publications · 486 citations

    3

    h-index

  2. PP
    Paul Pavlidis

    University of British Columbia, Canada

    3 publications · 236 citations

    3

    h-index

  3. JX
    Jindong Xie

    Sun Yat-sen University, China

    3 publications · 486 citations

    3

    h-index

  4. HS
    Hongjian Sun

    The University of Queensland, Australia

    2 publications · 207 citations

    2

    h-index

  5. YY
    Yingjiang Ye

    Peking University, China

    2 publications · 175 citations

    2

    h-index

1–5 of 940

Institutions

377

  1. Sun Yat-sen University

    Guangzhou, China

    7 h-index

    64 publications

    7.5K citations

  2. Chinese Academy of Medical Sciences & Peking Union Medical College

    Beijing, China

    7 h-index

    28 publications

    17.9K citations

  3. Sun Yat-sen University Cancer Center

    Guangzhou, China

    5 h-index

    49 publications

    6.5K citations

  4. Harvard University

    Cambridge, United States

    5 h-index

    12 publications

    358 citations

  5. Massachusetts Institute of Technology

    Cambridge, United States

    4 h-index

    12 publications

    737 citations

  6. Massachusetts General Hospital

    Boston, United States

    4 h-index

    13 publications

    892 citations

  7. University of Toronto

    Toronto, Canada

    4 h-index

    10 publications

    720 citations

  8. Shanghai Jiao Tong University

    Shanghai, China

    4 h-index

    13 publications

    336 citations

1–8 of 377

Venues

  1. Frontiers in Immunology

    9 publications · 253 citations

    9

    h-index

  2. Nucleic Acids Research

    6 publications · 5.9K citations

    6

    h-index

  3. Bioinformatics

    4 publications · 101 citations

    4

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 58 citations

    3

    h-index

  5. Cell Reports

    3 publications · 284 citations

    3

    h-index

1–5