Protter: interactive protein feature visualization and integration with experimental proteomic data

Ulrich Omasits, Christian H. Ahrens, S. Müller, +1

Bioinformatics

Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms

Lynne Turnbull, Masanori Toyofuku, Amelia L. Hynen, +17

Nature Communications

A Mass Spectrometric-Derived Cell Surface Protein Atlas

Damaris Bausch‐Fluck, Andreas Hofmann, Thomas Bock, +16

PLoS ONE

ImmunologyMolecular BiologyCell Surface ProteinsCancer BiologyTumor Biology +14

A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli

Matthias Urfer, Jasmina Bogdanović, Fabio Lo Monte, +7

Journal of Biological Chemistry

An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics

Ulrich Omasits, Adithi R. Varadarajan, Michael Schmid, +11

Genome Research

The AHL- and BDSF-Dependent Quorum Sensing Systems Control Specific and Overlapping Sets of Genes in Burkholderia cenocepacia H111

Nadine Schmid, Gabriella Pessi, Yinyue Deng, +7

PLoS ONE

Environmental SignalingGeneticsBacteriologyMolecular BiologyMolecular Genetics +16

Combine and Conquer: Surfactants, Solvents, and Chaotropes for Robust Mass Spectrometry Based Analyses of Membrane Proteins

Matthew Waas, Subarna Bhattacharya, Sandra Chuppa, +7

Analytical Chemistry

Proteinlipid InteractionRobust Mass SpectrometryMembrane ProteinsProtein PurificationProteomic Technology +15

Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

Ulrich Omasits, Maxime Québatte, Daniel J. Stekhoven, +5

Genome Research

EngineeringGeneticsMolecular BiologyTranscriptomics TechnologyGenomics +23

The Hemolymph Proteome of Fed and Starved Drosophila Larvae

Björn Handke, Ingrid Poernbacher, Sandra Goetze, +9

PLoS ONE

BiologyProteomic TechnologyStarved Drosophila LarvaeDrosophila LarvaeMedicine +12

vmdICE: A plug‐in for rapid evaluation of molecular dynamics simulations using VMD

Bernhard Knapp, Nadja Lederer, Ulrich Omasits, +1

Journal of Computational Chemistry