Yanming Di

The NBP Negative Binomial Model for Assessing Differential Gene Expression from RNA-Seq

Yanming Di, Daniel W. Schafer, Jason S. Cumbie et al. · Statistical Applications in Genetics and Molecular Biology · 2011 · 201 citations

Engineering, Genetics, Molecular Biology +19

The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster

Kathryn E. Bushley, Rajani Raja, Pankaj Jaiswal et al. · PLoS Genetics · 2013 · 173 citations · Full text

Comparative Genomics, Genetics, Molecular Biology +23

A comparative study of ripening among berries of the grape cluster reveals an altered transcriptional programme and enhanced ripening rate in delayed berries

Satyanarayana Gouthu, Shawn T. O’Neil, Yanming Di et al. · Journal of Experimental Botany · 2014 · 72 citations · Full text

GENE-Counter: A Computational Pipeline for the Analysis of RNA-Seq Data for Gene Expression Differences

Jason S. Cumbie, Jeffrey A. Kimbrel, Yanming Di et al. · PLoS ONE · 2011 · 67 citations · Full text

Gene Counts, Statistics Packages, Engineering +22

Methylome reorganization during in vitro dedifferentiation and regeneration of Populus trichocarpa

Kelly Vining, Kyle Pomraning, Larry Wilhelm et al. · BMC Plant Biology · 2013 · 57 citations · Full text