Jason S. Cumbie

High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes

Noah Fahlgren, Miya D. Howell, Kristin D. Kasschau et al. · PLoS ONE · 2007 · 1.2K citations · Full text

Biology, Mirna Genes, High-throughput Sequencing +15

Genome-Wide Profiling and Analysis of Arabidopsis siRNAs

Kristin D. Kasschau, Noah Fahlgren, Elisabeth J. Chapman et al. · PLoS Biology · 2007 · 528 citations · Full text

Transcriptional Regulation, Functional Genomics, 24-Nt Sirnas +15

Genome-Wide Analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICER-LIKE4 Pathway in<i>Arabidopsis</i>Reveals Dependency on miRNA- and tasiRNA-Directed Targeting

Miya D. Howell, Noah Fahlgren, Elisabeth J. Chapman et al. · The Plant Cell · 2007 · 410 citations · Full text

The NBP Negative Binomial Model for Assessing Differential Gene Expression from RNA-Seq

Yanming Di, Daniel W. Schafer, Jason S. Cumbie et al. · Statistical Applications in Genetics and Molecular Biology · 2011 · 201 citations

Engineering, Genetics, Molecular Biology +19

The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster

Kathryn E. Bushley, Rajani Raja, Pankaj Jaiswal et al. · PLoS Genetics · 2013 · 173 citations · Full text

Comparative Genomics, Genetics, Molecular Biology +23