The RAST Server: Rapid Annotations using Subsystems Technology

Ramy K. Aziz, Daniela Bartels, Aaron A. Best, +23

BMC Genomics

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

Thomas Brettin, James J. Davis, Terry Disz, +13

Scientific Reports

Complete Genome Sequence of the Methanogenic Archaeon, <b> <i>Methanococcus jannaschii</i> </b>

Carol J. Bult, Owen White, Gary J. Olsen, +36

Science

BiologyMicrobial SystematicsWhole-genome Random SequencingProkaryotic SystemCell Division +13

Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes

Jeremy A. Frank, Claudia I. Reich, Shobha Sharma, +3

Applied and Environmental Microbiology

GeneticsBacteriologyMolecular BiologyRrna GenesHigh Throughput Sequencing +16

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

Alice R. Wattam, James J. Davis, Rida Assaf, +25

Nucleic Acids Research

EngineeringGeneticsGenomicsBioinformatics DatabaseSpecific Antibiotics +16

KBase: The United States Department of Energy Systems Biology Knowledgebase

Adam P. Arkin, Robert W. Cottingham, Christopher S. Henry, +78

Nature Biotechnology

The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus

Hans-Peter Klenk, Rebecca A. Clayton, Jean-François Tomb, +47

Nature

BiologyPhylogeneticsProtistBiochemical TaxonomyComparative Genomics +7

fastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood

Gary J. Olsen, Hideo Matsuda, R. Hagstrom, +1

Computer applications in the biosciences

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

Gerard Deckert, Patrick V. Warren, Terry Gaasterland, +12

Nature

BiologyComplete GenomeMicrobial SystematicsMicrobiologyGenomics +2

Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR

Robert Olson, Rida Assaf, Thomas Brettin, +37

Nucleic Acids Research