Alison E. Mather

SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway

Brian J. Willett, Joe Grove, Oscar A. MacLean et al. · Nature Microbiology · 2022 · 701 citations · Full text

ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads

Martin Hunt, Alison E. Mather, Leonor Sánchez-Busó et al. · Microbial Genomics · 2017 · 617 citations · Full text

Bioinformatics, Rapid Antimicrobial Resistance, Antimicrobial Resistance Gene +14

Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

Vanessa Wong, Stephen Baker, Derek Pickard et al. · Nature Genetics · 2015 · 485 citations · Full text

Antimicrobial Resistance Gene, Molecular Epidemiology, Salmonella Typhi +10

Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7

Bo Meng, Steven A. Kemp, Guido Papa et al. · Cell Reports · 2021 · 446 citations · Full text

A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant <i>Staphylococcus aureus</i> pandemic

Matthew T. G. Holden, Li Yang Hsu, Kevin Kurt et al. · Genome Research · 2013 · 443 citations · Full text

Global Spread, Molecular Epidemiology, Antibiotic Resistance +23