Analysis of the genome sequences of three <i>Drosophila melanogaster</i> spontaneous mutation accumulation lines

Peter D. Keightley, Urmi Trivedi, Marian Thomson, +3

Genome Research

Hybrid assembly of an agricultural slurry virome reveals a diverse and stable community with the potential to alter the metabolism and virulence of veterinary pathogens

Ryan Cook, Steve Hooton, Urmi Trivedi, +6

Microbiome

Quality control of next-generation sequencing data without a reference

Urmi Trivedi, Timothée Cézard, Stephen Bridgett, +4

Frontiers in Genetics

GeneticsGenomicsHigh Throughput SequencingMolecular EcologyQuality Control +14

High-throughput sequence analysis of variants of human cytomegalovirus strains Towne and AD169

Nell S. Lurain, Peter Ghazal, Urmi Trivedi, +6

Journal of General Virology

Viral EvolutionMolecular VirologyViral DiagnosticsInverted DuplicationGenetics +13

Experimental evolution, genetic analysis and genome re-sequencing reveal the mutation conferring artemisinin resistance in an isogenic lineage of malaria parasites

Axel Martinelli, Katarzyna Modrzynska, Sofia Trindade Borges, +12

BMC Genomics

A telomere-to-telomere assembly of <i>Oscheius tipulae</i> and the evolution of rhabditid nematode chromosomes

Pablo Manuel González De la Rosa, Marian Thomson, Urmi Trivedi, +3

G3 Genes Genomes Genetics

Gradients in richness and turnover of a forest passerine's diet prior to breeding: A mixed model approach applied to faecal metabarcoding data

Jack D. Shutt, James A. Nicholls, Urmi Trivedi, +4

Molecular Ecology

Animal TaxonomyEngineeringForestryAgricultural EconomicsMixed Model Approach +16

Deep resequencing of serial sputum isolates of Mycobacterium tuberculosis during therapeutic failure due to poor compliance reveals stepwise mutation of key resistance genes on an otherwise stable genetic background

Nigel J. Saunders, Urmi Trivedi, Marian Thomson, +3

Journal of Infection

Medical MicrobiologyPulmonary TuberculosisAntimicrobial Resistance GeneKey Resistance GenesHealth Sciences +10

Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes

Philipp H. Schiffer, Étienne Danchin, Ann M. Burnell, +15

iScience

Digital gene expression analysis of two life cycle stages of the human-infective parasite, Trypanosoma brucei gambiense reveals differentially expressed clusters of co-regulated genes

Nicola Veitch, P. Johnson, Urmi Trivedi, +3

BMC Genomics