Concepedia

Jarno Alanko

JA

13

Publications

243

Citations

11

H-Index

2017

Active since

Affiliations

University of Helsinki(Current)

Dalhousie University

University of Florida

Centre de Recherche sur l'Information Scientifique et Technique

Statistics Finland

Jarno Alanko is an author at University of Helsinki specializing in engineering, diagnostic microbiology, and knowledge discovery.

Top concepts

EngineeringOmicsGenomicsMedicineMicrobiomeData MiningData ScienceEpidemiologyMicrobiologyBioinformatics

Publications per year

2017–2024

13

Publications

13

Themisto: a scalable colored <i>k</i> -mer index for sensitive pseudoalignment against hundreds of thousands of bacterial genomes

Jarno Alanko, Jaakko Vuohtoniemi, Tommi Mäklin et al. · Bioinformatics · 2023 · 49 citations · Full text

Bacterial genomic epidemiology with mixed samples

Tommi Mäklin, Teemu Kallonen, Jarno Alanko et al. · Microbial Genomics · 2021 · 44 citations · Full text

Engineering, Molecular Epidemiology, Genomic Epidemiology +18

Finding all maximal perfect haplotype blocks in linear time

Jarno Alanko, Hideo Bannai, Bastien Cazaux et al. · Algorithms for Molecular Biology · 2020 · 19 citations · Full text

Matchtigs: minimum plain text representation of k-mer sets

Sebastian Schmidt, Shahbaz Khan, Jarno Alanko et al. · Genome biology · 2023 · 19 citations · Full text

Minimum Plain-text Representation, Engineering, Information Retrieval +13

Wheeler languages

Jarno Alanko, Giovanna D’Agostino, Alberto Policriti et al. · Information and Computation · 2021 · 17 citations

Rows per page

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