Robust enumeration of cell subsets from tissue expression profiles

Aaron M. Newman, Chih Long Liu, Michael R. Green, +6

Nature Methods

EngineeringMedicineComputational BiologyRobust EnumerationGene Expression Profiling +6

The prognostic landscape of genes and infiltrating immune cells across human cancers

Andrew J. Gentles, Aaron M. Newman, Chih Long Liu, +11

Nature Medicine

Immune CellsCancer ImmunosurveillanceTumor HeterogeneityMedicineImmunology +10

Non–Small Cell Lung Cancer: Identifying Prognostic Imaging Biomarkers by Leveraging Public Gene Expression Microarray Data—Methods and Preliminary Results

Olivier Gevaert, Jiajing Xu, Chuong D. Hoang, +6

Radiology

Revealing a core signaling regulatory mechanism for pluripotent stem cell survival and self-renewal by small molecules

Yue Xu, Xiuwen Zhu, Heung Sik Hahm, +4

Proceedings of the National Academy of Sciences

Cell AdhesionAdult Stem CellSpecific Growth FactorCell ProliferationRegulatory Mechanism +15

Effect of reduced oxygen tension on chondrogenesis and osteogenesis in adipose-derived mesenchymal cells

Preeti Malladi, Yue Xu, Michael Chiou, +2

American Journal of Physiology-Cell Physiology

Poly(ADP-ribose) Polymerase-1 Signaling to Mitochondria in Necrotic Cell Death Requires RIP1/TRAF2-mediated JNK1 Activation

Yue Xu, Shuang Huang, Zheng Gang Liu, +1

Journal of Biological Chemistry

InflammationMitophagyMitochondrial BiogenesisMitochondrial FunctionMitochondrial Dysfunction +10

One systemic administration of transforming growth factor-beta 1 reverses age- or glucocorticoid-impaired wound healing.

Laurent Beck, Leo Deguzman, W P Lee, +3

Journal of Clinical Investigation

ImmunologyDermatologyInflammationSoft Tissue InjuryClinical Injury +18

Autophagy Contributes to Caspase-independent Macrophage Cell Death

Yue Xu, Sung Ouk Kim, Yilei Li, +1

Journal of Biological Chemistry

MitophagyApoptosisImmunologyCell DeathCell Death Mechanisms +16

Phosphoproteomic Analysis of Human Embryonic Stem Cells

Laurence M. Brill, Wen‐Cheng Xiong, Ki‐Bum Lee, +6

Cell stem cell

Embryonic Stem CellDevelopmental BiologyMedicineMorphogenesisStem Cell Research +6

Sonic Hedgehog Influences the Balance of Osteogenesis and Adipogenesis in Mouse Adipose-Derived Stromal Cells

Aaron W. James, Philipp Leucht, Benjamin Levi, +4

Tissue Engineering Part A

Regenerative MedicineMechanobiologyAdipose-derived Stromal CellsDevelopmental BiologyBone Morphogenic Protein +11