Joachim Johansen

Improved metagenome binning and assembly using deep variational autoencoders

Jakob Nybo Nissen, Joachim Johansen, Rosa Lundbye Allesøe et al. · Nature Biotechnology · 2021 · 691 citations

Life Sciences, Bioinformatics, Molecular Biology +13

A reference map of potential determinants for the human serum metabolome

Noam Bar, Tal Korem, Omer Weissbrod et al. · Nature · 2020 · 449 citations · Full text

Life Sciences, Biochemistry, Mass Spectrometric Analysis +15

Genome binning of viral entities from bulk metagenomics data

Joachim Johansen, Damian R. Plichta, Jakob Nybo Nissen et al. · Nature Communications · 2022 · 120 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Discovery of drug–omics associations in type 2 diabetes with generative deep-learning models

Rosa Lundbye Allesøe, Agnete Troen Lundgaard, Ricardo Hernández Medina et al. · Nature Biotechnology · 2023 · 105 citations · Full text

Life Sciences, Bioinformatics, Pharmacology +15

Centenarians have a diverse gut virome with the potential to modulate metabolism and promote healthy lifespan

Joachim Johansen, Koji Atarashi, Yasumichi Arai et al. · Nature Microbiology · 2023 · 104 citations

Education, Nutritional Sciences, Physiology +13