Improved metagenome binning and assembly using deep variational autoencoders

Jakob Nybo Nissen, Joachim Johansen, Rosa Lundbye Allesøe, +8

Nature Biotechnology

Metagenome BinningGenomicsSequence AssemblySystems Biology

A reference map of potential determinants for the human serum metabolome

Noam Bar, Tal Korem, Omer Weissbrod, +168

Nature

Reference MapHuman Serum MetabolomeMedicinePhysiologyBioanalysis +9

Genome binning of viral entities from bulk metagenomics data

Joachim Johansen, Damian R. Plichta, Jakob Nybo Nissen, +8

Nature Communications

Discovery of drug–omics associations in type 2 diabetes with generative deep-learning models

Rosa Lundbye Allesøe, Agnete Troen Lundgaard, Ricardo Hernández Medina, +164

Nature Biotechnology

Centenarians have a diverse gut virome with the potential to modulate metabolism and promote healthy lifespan

Joachim Johansen, Koji Atarashi, Yasumichi Arai, +8

Nature Microbiology

BiologyNutritionLifespan ExtensionLongevityMedicine +6

The ubiquitin ligase RFWD3 is required for translesion DNA synthesis

Irene Gallina, Ivo A. Hendriks, Saskia Hoffmann, +13

Molecular Cell

Flame Synthesis of Nanoparticles

Tue Johannessen, J.R. Jensen, Majid Mosleh, +3

Process Safety and Environmental Protection

NanoparticlesChemical EngineeringEngineeringNanomaterialsChemistry +2

Variation in the Plasma Membrane Monoamine Transporter (PMAT) (Encoded by <i>SLC29A4</i> ) and Organic Cation Transporter 1 (OCT1) (Encoded by <i>SLC22A1</i> ) and Gastrointestinal Intolerance to Metformin in Type 2 Diabetes: An IMI DIRECT Study

Adem Y. Dawed, Kaixin Zhou, Nienke van Leeuwen, +160

Diabetes Care

The CD4+ T cell response to a commensal-derived epitope transitions from a tolerant to an inflammatory state in Crohn’s disease

Thomas K. Pedersen, Eric Brown, Damian R. Plichta, +8

Immunity

InflammationChronic Inflammatory DiseasesInflammatory DiseaseMucosal ImmunologyCrohn ’ +9

Genetic analysis of blood molecular phenotypes reveals common properties in the regulatory networks affecting complex traits

Andrew Brown, Juan Fernández‐Tajes, Mun‐Gwan Hong, +150

Nature Communications