Tianming Zhou

Multiscale and integrative single-cell Hi-C analysis with Higashi

Ruochi Zhang, Tianming Zhou, Jian Ma · Nature Biotechnology · 2021 · 175 citations · Full text

ComplexContact: a web server for inter-protein contact prediction using deep learning

Hong Zeng, Sheng Wang, Tianming Zhou et al. · Nucleic Acids Research · 2018 · 148 citations · Full text

Engineering, Structural Bioinformatics, Molecular Biology +17

SpiceMix enables integrative single-cell spatial modeling of cell identity

Benjamin Chidester, Tianming Zhou, Shahul Alam et al. · Nature Genetics · 2023 · 96 citations · Full text

Engineering, Medicine, Spatial Omics +7

GAGE-seq concurrently profiles multiscale 3D genome organization and gene expression in single cells

Tianming Zhou, Ruochi Zhang, Deyong Jia et al. · Nature Genetics · 2024 · 49 citations · Full text

Bioinformatics, Chromatin, Functional Genomics +15

Ultrafast and interpretable single-cell 3D genome analysis with Fast-Higashi

Ruochi Zhang, Tianming Zhou, Jian Ma · Cell Systems · 2022 · 44 citations · Full text

Bioinformatics, Long-read Sequencing, Single Cell Sequencing +10