High-Resolution Analysis of Parent-of-Origin Allelic Expression in the Arabidopsis Endosperm

Philip Wolff, Isabelle Weinhofer, Jonathan Séguin, +7

PLoS Genetics

Plant GeneticsEpigenetic ChangeGeneticsDna MethylationMolecular Genetics +14

Primary and Secondary siRNAs in Geminivirus-induced Gene Silencing

Michael Aregger, Basanta Kumar Borah, Jonathan Séguin, +8

PLoS Pathogens

De Novo Reconstruction of Consensus Master Genomes of Plant RNA and DNA Viruses from siRNAs

Jonathan Séguin, Rajendran Rajeswaran, Nachelli Malpica-López, +6

PLoS ONE

Array-CGH analysis indicates a high prevalence of genomic rearrangements in holoprosencephaly: An updated map of candidate loci

Claude Bendavid, Lucie Rochard, Christà ̈le Dubourg, +12

Human Mutation

GeneticsPathologyGenomic RearrangementsDisease Gene IdentificationGenomics +16

Cell-Type-Specific Gene Expression Profiling in Adult Mouse Brain Reveals Normal and Disease-State Signatures

Nicolas Mérienne, Cécile Meunier, Anne T. Schneider, +11

Cell Reports

Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus

Alejandro Fuentes, Natacha Carlos, Yoslaine Ruiz, +13

Molecular Plant-Microbe Interactions

Field TrialEngineeringBotanyGeneticsPlant Pathology +15

Efficient Gene Tree Correction Guided by Genome Evolution

Emmanuel Noutahi, Magali Semeria, Manuel Lafond, +5

PLoS ONE

Caffeine intake exerts dual genome-wide effects on hippocampal metabolism and learning-dependent transcription

Isabel Paiva, Lucrezia Cellai, Céline Mériaux, +31

Journal of Clinical Investigation

MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies

Jonathan Séguin, Patricia Otten, Loic Bærlocher, +2

Journal of Virological Methods

BioinformaticsViral EvolutionEngineeringBioinformatics ToolViral Quasispecies +13

Interactions of Rice Tungro Bacilliform Pararetrovirus and Its Protein P4 with Plant RNA-Silencing Machinery

Rajendran Rajeswaran, Victor Golyaev, Jonathan Séguin, +3

Molecular Plant-Microbe Interactions

Viral ReplicationGeneticsProtein P4Molecular BiologyPlant Pathology +17