Edward Catoiu

Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance

Erol Kavvas, Edward Catoiu, Nathan Mih et al. · Nature Communications · 2018 · 186 citations · Full text

Life Sciences, Bioinformatics, Genetics +17

COBRAme: A computational framework for genome-scale models of metabolism and gene expression

Colton J. Lloyd, Ali Ebrahim, Laurence Yang et al. · PLoS Computational Biology · 2018 · 179 citations · Full text

Life Sciences, Bioinformatics, Biology +13

Genome-scale metabolic reconstructions of multiple Salmonella strains reveal serovar-specific metabolic traits

Yara Seif, Erol Kavvas, Jean‐Christophe Lachance et al. · Nature Communications · 2018 · 155 citations · Full text

Life Sciences, Microbiology, Molecular Biology +16

OxyR Is a Convergent Target for Mutations Acquired during Adaptation to Oxidative Stress-Prone Metabolic States

Amitesh Anand, Ke Chen, Edward Catoiu et al. · Molecular Biology and Evolution · 2019 · 75 citations · Full text

Life Sciences, Genetics, Microbiology +17

ssbio: a Python framework for structural systems biology

Nathan Mih, Elizabeth Brunk, Ke Chen et al. · Bioinformatics · 2018 · 46 citations · Full text

Life Sciences, Bioinformatics, Systems Biology +12