Victor Ovchinnikov

Free energy of conformational transition paths in biomolecules: The string method and its application to myosin VI

Victor Ovchinnikov, Martin Karplus, Eric Vanden‐Eijnden · The Journal of Chemical Physics · 2011 · 133 citations · Full text

Free Energy, Computational Biophysics, Engineering +15

QM/MM free energy simulations: recent progress and challenges

Xiya Lu, Fang Dong, Shingo Ito et al. · Molecular Simulation · 2016 · 124 citations · Full text

Free Energy, Engineering, Energy Efficiency +24

Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies

Victor Ovchinnikov, Joy E. Louveau, John P. Barton et al. · eLife · 2018 · 101 citations · Full text

Neutralizing Antibodies, Immunology, Molecular Biology +21

Numerical simulations of boundary-layer bypass transition due to high-amplitude free-stream turbulence

Victor Ovchinnikov, Meelan M. Choudhari, Ugo Piomelli · Journal of Fluid Mechanics · 2008 · 98 citations

Aeroacoustics, High-amplitude Free-stream Turbulence, Engineering +17

Analysis and Elimination of a Bias in Targeted Molecular Dynamics Simulations of Conformational Transitions: Application to Calmodulin

Victor Ovchinnikov, Martin Karplus · The Journal of Physical Chemistry B · 2012 · 66 citations

Computational Biophysics, Biophysical Modeling, Engineering +14