Whole-Exome Sequencing of 2,000 Danish Individuals and the Role of Rare Coding Variants in Type 2 Diabetes

Kirk E. Lohmueller, Thomas Sparsø, Qibin Li, +23

The American Journal of Human Genetics

LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe

Anaïs Painset, Jonas T. Björkman, Kristoffer Kiil, +15

Microbial Genomics

Molecular EpidemiologyMicrobial PathogensGeneticsFood Processing FacilitiesGenomics +23

Origin and Evolution of European Community-Acquired Methicillin-Resistant Staphylococcus aureus

Marc Stegger, Thierry Wirth, Paal Skytt Andersen, +26

mBio

Whole-genome Sequencing Used to Investigate a Nationwide Outbreak of Listeriosis Caused by Ready-to-eat Delicatessen Meat, Denmark, 2014

Anne K. Jensen, Eva Møller Nielsen, Jonas T. Björkman, +11

Clinical Infectious Diseases

Diversity and Population Overlap between Avian and Human Escherichia coli Belonging to Sequence Type 95

Steffen Jørgensen, Marc Stegger, Eglė Kudirkienė, +12

mSphere

Closing gaps for performing a risk assessment on Listeria monocytogenes in ready‐to‐eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis

Eva Møller Nielsen, Jonas T. Björkman, Kristoffer Kiil, +11

EFSA Supporting Publications

Molecular EpidemiologyFood Processing FacilitiesClosing GapsJournalismFood Chain +19

Plasmid-borne colistin resistance gene mcr-3 in Salmonella isolates from human infections, Denmark, 2009–17

Eva Litrup, Kristoffer Kiil, Anette M. Hammerum, +3

Eurosurveillance

WGS based study of the population structure of Salmonella enterica serovar Infantis

Pernille Gymoese, Kristoffer Kiil, Mia Torpdahl, +5

BMC Genomics

Molecular Typing and Epidemiology of Human Listeriosis Cases, Denmark, 2002–20121

Anne K. Jensen, Jonas T. Björkman, Steen Ethelberg, +3

Emerging infectious diseases

Microbial PathogensMolecular EpidemiologyMolecular TypingBacterial PathogensRelated Pfge Types +15

Whole-genome comparison of urinary pathogenic Escherichia coli and faecal isolates of UTI patients and healthy controls

Karen Leth Nielsen, Marc Stegger, Kristoffer Kiil, +5

International Journal of Medical Microbiology

Antimicrobial Resistance GeneFaecal IsolatesUti PatientsWhole-genome ComparisonPathogen Characterization +5