Concepedia

Integrated physiological, hormonal, and transcriptomic analyses reveal a novel E3 ubiquitin ligase-mediated cold acclimation mechanism for the acquisition of cold tolerance in sweet osmanthus

Yuanzheng Yue, Hongtao Wang, Xiulian Yang, Lianggui Wang

Industrial Crops and Products · 2024 · 12 citations · 51 references

Concepts

Life SciencesBotanyPlant BiologyPlant EcophysiologyPlant GeneticsPlant Molecular BiologyCold HardinessCold Stress PhysiologyHeat Stress ToleranceHormone CrosstalkTemperature PhysiologyTemperature ResponsesCold Hardiness PhysiologyCold Stress PhenotypingCold Stress ResponsesCold Stress Signaling PathwaysCold Stress Tolerance GeneticsCold Stress TranscriptomicsTemperature Stress Signaling

References

51

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Kenneth J. Livak, Thomas D. Schmittgen · Methods · 2001 · 181.5K citations

Life Sciences, Molecular Biology, Molecular Genetics +9

fastp: an ultra-fast all-in-one FASTQ preprocessor

Shifu Chen, Yanqing Zhou, Yaru Chen et al. · Bioinformatics · 2018 · 29.7K citations · Full text

Computing, Computer Engineering, Computer Science +8

WGCNA: an R package for weighted correlation network analysis

Peter Langfelder, Steve Horvath · BMC Bioinformatics · 2008 · 29.1K citations · Full text

Life Sciences, Bioinformatics, Systems Biology +15

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

Daehwan Kim, Joseph M. Paggi, Chanhee Park et al. · Nature Biotechnology · 2019 · 15.7K citations · Full text

Life Sciences, Bioinformatics, Genetics +12

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea, Geo Pertea, Corina Antonescu et al. · Nature Biotechnology · 2015 · 15.5K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +10