Concepedia

Microbiota metabolism of intestinal amino acids impacts host nutrient homeostasis and physiology

Tingting Li, Xi Chen, Da Huo, Mohammad Arifuzzaman, Shanshan Qiao, Wen‐Bing Jin, Huiqing Shi, Xin Li, Iliyan D. Iliev, David Artis,

Cell Host & Microbe · 2024 · 187 citations · 45 references

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45

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

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Prokka: rapid prokaryotic genome annotation

Torsten Seemann · Bioinformatics · 2014 · 19.6K citations

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A Broad Host Range Mobilization System for In Vivo Genetic Engineering: Transposon Mutagenesis in Gram Negative Bacteria

Reinhard Simon, U. B. Priefer, Alfred Pühler · Bio/Technology · 1983 · 7.3K citations

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