Nature Biotechnology · 2024 · 51 citations · 93 references
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Fast, sensitive and accurate integration of single-cell data with Harmony
Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 9.5K citations · Full text
UMAP: Uniform Manifold Approximation and Projection
Leland McInnes, John Healy, Nathaniel Saul et al. · The Journal of Open Source Software · 2018 · 8.9K citations · Full text
SCANPY: large-scale single-cell gene expression data analysis
F. Alexander Wolf, Philipp Angerer, Fabian J. Theis · Genome biology · 2018 · 8.6K citations · Full text
Spatial reconstruction of single-cell gene expression data
Rahul Satija, Jeffrey A. Farrell, David Gennert et al. · Nature Biotechnology · 2015 · 7.3K citations · Full text
Functional Genomics, Engineering, Single Cell Sequencing +10