Journal of Experimental Botany · 2024 · 11 citations · 66 references
Life SciencesPlant BiologyPlant SciencesGene ExpressionPlant GeneticsPlant Molecular BiologyCold Stress PhysiologyFlower DevelopmentPlant Developmental GeneticsPlant Gene ExpressionPlant Transcriptional RegulationDual-luciferase AssaysFloral Homeotic GenesFloral Organ IdentityHomeotic TransformationLuciferase Reporter AssaysMyb Transcription FactorsPetal DevelopmentTransient Gene Silencing
Low temperatures affect flower development in rose (Rosa hybrida), increasing petaloid stamen number and reducing normal stamen number. We identified the low-temperature-responsive R2R3-MYB transcription factor RhMYB17, which is homologous to Arabidopsis MYB17 by similarity of protein sequences. RhMYB17 was up-regulated at low temperatures, and RhMYB17 transcripts accumulated in floral buds. Transient silencing of RhMYB17 by virus-induced gene silencing decreased petaloid stamen number and increased normal stamen number. According to the ABCDE model of floral organ identity, class A genes APETALA 1 (AP1) and AP2 contribute to sepal and petal formation. Transcription factor binding analysis identified RhMYB17 binding sites in the promoters of rose APETALA 2 (RhAP2) and APETALA 2-LIKE (RhAP2L). Yeast one-hybrid assays, dual-luciferase reporter assays, and electrophoretic mobility shift assays confirmed that RhMYB17 directly binds to the promoters of RhAP2 and RhAP2L, thereby activating their expression. RNA sequencing further demonstrated that RhMYB17 plays a pivotal role in regulating the expression of class A genes, and indirectly influences the expression of the class C gene. This study reveals a novel mechanism for the homeotic transformation of floral organs in response to low temperatures.
66
Differential expression analysis for sequence count data
Simon Anders, Wolfgang Huber · Genome biology · 2010 · 16.4K citations · Full text
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
Chengjie Chen, Hao Chen, Yi Zhang et al. · Molecular Plant · 2020 · 15.2K citations · Full text
Timothy L. Bailey, James Johnson, Charles E. Grant et al. · Nucleic Acids Research · 2015 · 5.5K citations · Full text