Briefings in Bioinformatics · 2023 · 598 citations · 92 references
Life SciencesBiomedical InformaticsPharmacologyDrug DiscoveryNetwork BiologySystems PharmacologyDisease Network BiologyDrug-target Interaction NetworksMolecular Interaction NetworksNetwork InferenceNetwork MedicineNetwork PharmacologyMethodological ProgressMulti-omics Disease NetworksNetwork-based Drug DiscoveryNetwork-based Precision MedicinePharmacological Network AnalysisTraditional Chinese MedicineTraditional Medicine Network PharmacologyTraditional Medicine Systems
Network pharmacology (NP) provides a new methodological perspective for understanding traditional medicine from a holistic perspective, giving rise to frontiers such as traditional Chinese medicine network pharmacology (TCM-NP). With the development of artificial intelligence (AI) technology, it is key for NP to develop network-based AI methods to reveal the treatment mechanism of complex diseases from massive omics data. In this review, focusing on the TCM-NP, we summarize involved AI methods into three categories: network relationship mining, network target positioning and network target navigating, and present the typical application of TCM-NP in uncovering biological basis and clinical value of Cold/Hot syndromes. Collectively, our review provides researchers with an innovative overview of the methodological progress of NP and its application in TCM from the AI perspective.
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