Concepedia

DeepMainmast: integrated protocol of protein structure modeling for cryo-EM with deep learning and structure prediction

Genki Terashi, Xiao Wang, Devashish Prasad, Tsukasa Nakamura, Daisuke Kihara

Nature Methods · 2023 · 68 citations · 37 references

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References

37

UCSF Chimera—A visualization system for exploratory research and analysis

Eric F. Pettersen, Thomas D. Goddard, Conrad C. Huang et al. · Journal of Computational Chemistry · 2004 · 47.8K citations

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Highly accurate protein structure prediction with AlphaFold

John Jumper, Alexander Pritzel, Tim Green et al. · Nature · 2021 · 45.2K citations · Full text

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Features and development of <i>Coot</i>

Paul Emsley, Bernhard Lohkamp, W. G. Scott et al. · Acta Crystallographica Section D Biological Crystallography · 2010 · 29.6K citations · Full text

, , +16

The Truck Dispatching Problem

George B. Dantzig, J. H. Ramser · Management Science · 1959 · 4.9K citations

, , +17

TM-align: a protein structure alignment algorithm based on the TM-score

Yang Zhang · Nucleic Acids Research · 2005 · 4K citations · Full text

, , +15