Angewandte Chemie International Edition · 2023 · 23 citations · 39 references
EngineeringBiochemistryChemical BiologyBiocatalysisPost-translational ModificationProtein EngineeringCatalytic MechanismsPeptide ChemistryPeptide IdentificationPost-translational Modification EngineeringProtein ChemistryProtein Expression EngineeringMetal Nanoparticle CatalystsNanoparticle CatalystsPeptide Coupling ReagentsPost-translationally Modified Peptide EngineeringPost-translationally Modified PeptidesPurificationSubstrate ScopeSuzuki - Miyaura Coupling
Bio-orthogonal reactions for modification of proteins and unprotected peptides are of high value in chemical biology. The combination of enzymatic halogenation with transition metal-catalyzed cross-coupling provides a feasible approach for the modification of proteins and unprotected peptides. By a semirational protein engineering approach, variants of the tryptophan 6-halogenase Thal were identified that enable efficient bromination of peptides with a C-terminal tryptophan residue. The substrate scope was explored using di-, tri-, and tetrapeptide arrays, leading to the identification of an optimized peptide tag we named BromoTrp tag. This tag was introduced into three model proteins. Preparative scale post-translational bromination was possible with only a single cultivation and purification step using the brominating E. coli coexpression system Brocoli. Palladium-catalyzed Suzuki-Miyaura cross-coupling of the bromoarene was achieved with Pd nanoparticle catalysts at 37 °C, highlighting the rich potential of this strategy for bio-orthogonal functionalization and conjugation.
39
CASTp 3.0: computed atlas of surface topography of proteins
Wei Tian, Chang Chen, Xue Lei et al. · Nucleic Acids Research · 2018 · 2.4K citations · Full text
Hydrolytic Stability of Hydrazones and Oximes
Jeet Kalia, Ronald T. Raines · Angewandte Chemie International Edition · 2008 · 879 citations · Full text
P H Hirel, M J Schmitter, P Dessen et al. · Proceedings of the National Academy of Sciences · 1989 · 765 citations · Full text
Logomaker: beautiful sequence logos in Python
Ammar Tareen, Justin B. Kinney · Bioinformatics · 2019 · 546 citations · Full text