Concepedia

ProS-GNN: Predicting effects of mutations on protein stability using graph neural networks

Shuyu Wang, Hongzhou Tang, Peng Shan, Zhaoxia Wu, Lei Zuo

Computational Biology and Chemistry · 2023 · 41 citations · 37 references

DOI

Concepts

References

37

Calculating Structures and Free Energies of Complex Molecules:  Combining Molecular Mechanics and Continuum Models

Peter A. Kollman, Irina Massova, Carolina Reyes et al. · Accounts of Chemical Research · 2000 · 4.9K citations

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I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure

Emidio Capriotti, Piero Fariselli, Rita Casadio · Nucleic Acids Research · 2005 · 2.1K citations · Full text

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Predicting Changes in the Stability of Proteins and Protein Complexes: A Study of More Than 1000 Mutations

Raphaël Guérois, Jens Erik Nielsen, Luís Serrano · Journal of Molecular Biology · 2002 · 1.8K citations

, , +14

Quantum-chemical insights from deep tensor neural networks

Kristof T. Schütt, Farhad Arbabzadah, Stefan Chmiela et al. · Nature Communications · 2017 · 1.5K citations · Full text

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Prediction of protein stability changes for single‐site mutations using support vector machines

Jianlin Cheng, Arlo Randall, Pierre Baldi · Proteins Structure Function and Bioinformatics · 2005 · 1.2K citations

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