Cell Reports · 2023 · 15 citations · 57 references
57
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.1K citations · Full text
Salmon provides fast and bias-aware quantification of transcript expression
Rob Patro, Geet Duggal, Michael I. Love et al. · Nature Methods · 2017 · 12.7K citations · Full text
SCANPY: large-scale single-cell gene expression data analysis
F. Alexander Wolf, Philipp Angerer, Fabian J. Theis · Genome biology · 2018 · 8.6K citations · Full text