Concepedia

Archival single-cell genomics reveals persistent subclones during DCIS progression

Kaile Wang, Tapsi Kumar, Junke Wang, Darlan Conterno Minussi, Emi Sei, Jianzhuo Li, Tuan M. Tran, Aatish Thennavan, Min Hu, Zhenna Xiao,

Cell · 2023 · 55 citations · 47 references

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47

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

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BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

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Comprehensive molecular portraits of human breast tumours

Nature · 2012 · 12.4K citations · Full text

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Complex heatmaps reveal patterns and correlations in multidimensional genomic data

Zuguang Gu, Roland Eils, Matthias Schlesner · Bioinformatics · 2016 · 10.9K citations · Full text

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UMAP: Uniform Manifold Approximation and Projection for Dimension Reduction

Leland McInnes, John J. Healy · arXiv (Cornell University) · 2018 · 7.5K citations · Full text

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