Journal of the American Chemical Society · 2023 · 27 citations · 49 references
Life SciencesBiotechnologyMicrobiologyDrug DiscoveryMetabolismStructural BiologyAntimicrobial PeptidesMicrobial Natural Product BiosynthesisPeptide ChemistryAmide HydrolysisAnti-inflammatory ActivityAntibacterial PeptidesPost-translationally Modified Peptide BiosynthesisPost-translationally Modified PeptidesRibosomally Synthesized Peptide BiosynthesisRibosomally Synthesized PeptidesSecondary Metabolites
The genomes of myxobacteria harbor a variety of biosynthetic gene clusters encoding numerous secondary metabolites, including ribosomally synthesized and post-translationally modified peptides (RiPPs) with diverse chemical structures and biological activities. However, the biosynthetic potential of RiPPs from myxobacteria remains barely explored. Herein, we report a novel myxobacteria lanthipeptide myxococin identified from Myxococcus fulvus . Myxococins represent the first example of lanthipeptides, of which the characteristic multiple thioether rings are installed by employing a Class II lanthipeptide synthetase MfuM and a Class I lanthipeptide cyclase MfuC in a cascaded way. Unprecedentedly, we biochemically characterized the first M61 family aminopeptidase MfuP involved in RiPP biosynthesis, demonstrating that MfuP showed the activity of an endopeptidase activity. MfuP is leader-independent but strictly selective for the multibridge structure of myxococin A and responsible for unwrapping two rings via amide bond hydrolysis, yielding myxococin B. Furthermore, the X-ray crystal structure of MfuP and structural analysis, including active-site mutations, are reported. Finally, myxococins are evaluated to exhibit anti-inflammatory activity in lipopolysaccharide-induced macrophages without detectable cytotoxicity.
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Pfam: The protein families database in 2021
Jaina Mistry, Sara Chuguransky, Lowri Williams et al. · Nucleic Acids Research · 2020 · 7.8K citations · Full text
CASTp 3.0: computed atlas of surface topography of proteins
Wei Tian, Chang Chen, Xue Lei et al. · Nucleic Acids Research · 2018 · 2.4K citations · Full text