Concepedia

Mother-to-infant microbiota transmission and infant microbiota development across multiple body sites

Debby Bogaert, Gina J van Beveren, Emma M. de Koff, Paula Lusarreta Parga, Carlos E. Balcazar Lopez, Lilian Koppensteiner, Mélanie Clerc, Raïza Hasrat, Kayleigh Arp, Mei Ling J. N. Chu,

Cell Host & Microbe · 2023 · 240 citations · 50 references

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50

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu, Li-Gen Wang, Yanyan Han et al. · OMICS A Journal of Integrative Biology · 2012 · 38.3K citations

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DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

, , +9

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast, Elmar Pruesse, Pelin Yilmaz et al. · Nucleic Acids Research · 2012 · 34K citations · Full text

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phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

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Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · Proceedings of the National Academy of Sciences · 2010 · 10K citations

, , +14