Microbiology Resource Announcements · 2023 · 14 citations · 7 references
Life SciencesGeneticsMicrobiologyBacteriologyGenomicsMicrobial GenomicsDna SequencingEnvironmental Microbial GenomicsGenome SequencingMicrobial Genome StructurePathogen GenomicsPathogen Sequence AnalysisNanopore SequencingPathogen Genome SequencingWhole-genome Sequence Analysis
Here, we present a 4,508,936-bp complete genome sequence of Stenotrophomonas maltophilia strain HW002Y, which was isolated from the tap water in an intensive care unit at Sultan Ahmad Shah Medical Centre at the International Islamic University of Malaysia (Kuantan, Pahang, Malaysia). Sequencing was performed using a Nanopore Flongle flow cell.
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Assembly of long, error-prone reads using repeat graphs
Mikhail Kolmogorov, Jeffrey Yuan, Yu Lin et al. · Nature Biotechnology · 2019 · 6.3K citations
A large-scale evaluation of algorithms to calculate average nucleotide identity
Seok-Hwan Yoon, Sung Min Ha, Jeongmin Lim et al. · Antonie van Leeuwenhoek · 2017 · 3.6K citations
Fast and accurate de novo genome assembly from long uncorrected reads
Robert Vaser, Ivan Sović, Niranjan Nagarajan et al. · Genome Research · 2017 · 3.4K citations · Full text
metaFlye: scalable long-read metagenome assembly using repeat graphs
Mikhail Kolmogorov, Derek M. Bickhart, Bahar Behsaz et al. · Nature Methods · 2020 · 1.1K citations · Full text