Microbial Cell Factories · 2023 · 12 citations · 57 references
Life SciencesBiochemistryMolecular BiologyGenetic EngineeringGenome EditingGlycobiologyGlycan BiosynthesisGlycan StructureGlycosylation PathwaysMicrobial GlycobiologyN-linked GlycosylationPlant GlycobiologyCell Factory EngineeringGolgi Apparatus GlycosylationN-glycan MannosylationN-glycan ProcessingN-linked Glycan BiosynthesisN-linked Glycosylation In MicrobesProtein Glycosylation PathwaysProtein N-glycosylation Pathway
Phaeodactylum tricornutum (Pt) is a critical microbial cell factory to produce a wide spectrum of marketable products including recombinant biopharmaceutical N-glycoproteins. N-glycosylation modification of proteins is important for their activity, stability, and half-life, especially some special modifications, such as fucose-modification by fucosyltransferase (FucT). Three PtFucTs were annotated in the genome of P. tricornutum, PtFucT1 was located on the medial/trans-Golgi apparatus and PtFucT2-3 in the plastid stroma. Algal growth, biomass and photosynthesis efficiency were significantly inhibited in a knockout mutant of PtFucT1 (PtFucT1-KO). PtFucT1 played a role in non-core fucose modification of N-glycans. The knockout of PtFucT1 might affect the activity of PtGnTI in the complex and change the complex N-glycan to mannose type N-glycan. The study provided critical information for understanding the mechanism of protein N-glycosylation modification and using microalgae as an alternative ecofriendly cell factory to produce biopharmaceuticals.
57
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text
Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text
The Pfam protein families database in 2019
Sara El-Gebali, Jaina Mistry, Alex Bateman et al. · Nucleic Acids Research · 2018 · 5.2K citations · Full text
The InterPro protein families and domains database: 20 years on
Matthias Blum, Hsin-Yu Chang, Sara Chuguransky et al. · Nucleic Acids Research · 2020 · 2.4K citations · Full text
Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics
Paul J. Boersema, Reinout Raijmakers, Simone Lemeer et al. · Nature Protocols · 2009 · 1.4K citations