Concepedia

Uncovering the emergence of HSCs in the human fetal bone marrow by single-cell RNA-seq analysis

Zhaofeng Zheng, Han He, Xinyu Tang, Han Zhang, Fanglin Gou, Hua Yang, Jiaxuan Cao, Shujuan Shi, Zining Yang, Guohuan Sun,

Cell stem cell · 2022 · 53 citations · 69 references

Concepts

Life SciencesCell BiologyDevelopmental BiologyCell DifferentiationStem Cell BiologyTranscriptomicsHematopoietic DevelopmentHematopoietic Stem Cell BiologyHematopoietic Stem CellsSingle-cell AnalysisSingle-cell Rna Sequencing AnalysisSingle-cell TranscriptomicsFetal Hematopoietic Stem CellsRna Sequencing (Rna-seq)Single-cell Lineage AnalysisSingle-cell Rna Sequencing

References

69

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha et al. · Proceedings of the National Academy of Sciences · 2005 · 56.7K citations · Full text

Life Sciences, Bioinformatics, Oncology +12

HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 26.1K citations · Full text

Engineering, Computer Engineering, Computer Science +3

HTSeq—a Python framework to work with high-throughput sequencing data

Simon Anders, Paul Theodor Pyl, Wolfgang Huber · Bioinformatics · 2014 · 22.7K citations · Full text

Life Sciences, Bioinformatics, Biology +11

Comprehensive Integration of Single-Cell Data

Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16.9K citations · Full text

Life Sciences, Bioinformatics, Cell Biology +14

Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler, Paul Hoffman, Peter Smibert et al. · Nature Biotechnology · 2018 · 14.7K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +14